Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00330 ATGGCGAGCATCGTCAGTAGCCTTCTGGCCAGGCCTATACAAATGGCAGACCAGGTAACAAAGGGTGCGGATGGTGCTCAAAATTTCAAACAAGATTGTTTAGAACTCAAGGCCAAGACAGAGAAGCTCGCTGAACTTCTTCGTCAAGCTGCCAGATCCAGCTCTGAATTATATGAGCGTCCTACAAGGCGTATCATCGATGACACAGAACAAGTTCTAGAAAAAGCTCTTACCCTCATCACCAAATGCTGTGCTAATGGCATGAGAAGGCTTTTCACCATCATACCCACCGCTGCATTTCGAAAAACGTCGATGCAGCTTGAGAATTCGATAGGAGATTTGCATTGGCTTCTTAGAGTGTCTGCCTCAGCAGATGATCGTGACGACGAGTACCTTGGCCTCCCTCCCATCGCTGCCAATGAGCCTATCCTGTGTCTCATATGGGAACAAATTGCGATATTGCTTTCTGCGGATTCATTAGAGGAACGTTCAGATGCTGCAGCTTCATTGGTTTCATTGGCTAGGGACAATGACAGGTATGGTAAATTGATCATTGAGGAAGGTGGGGTTCCACCTTTATTAAAATTATTGAAGGAAGGTAATCATGAAGGTCAGGAAAATGCAGCTCGGGCCGTTGGTTTGCTTGGGAGTGACCCTGAAAACGTCGAACATATTGTGAACGCAGGTGCTTGTTCAGTGTTCACCAAAATCCTCAAAGATGGTGACATGAAAATTCAATTGGTGGTGGCTTGGGCTATTTCAGAAATGGCTGGGAACCATCCGAAATGCCAAGACCATTTTGCTCAGAACAATGCAATAAGATTGCTTGTCAGTCATCTTGCGTATGGTACCATTCAAGAACATAGCAAATATGCCCTCGTAAACAAAAAGAAAATGTCAAGTGATAACACGAATTCTGAAACATACGTTACCAATGTTCCTCACCACATAGGATACCAGGGGAATAACCATATTCACAATGTGATATTGAATACCATGGAAATGAAGAATCAAGCTCCTGGCCAACATATTAACCCCACCAAGAGCAACAATAATAATCCAAAGAAGACGCAGATATCGGTGGGAGCACCGAGCATCAAGGGAAGAGAATTAGAAGATTCAGGTTCAAAGGCTGAAATGAAGGCCATGGCAGCCAAAGCCCTTTGGCAACTGGCCAGAGGCAATGCCTCCATCTGTCGCAGTATAACCGAGTCAAAGGCGCTATTGTGCTTTGCAGTTTTACTCGAGAAGGGCCTGGAAGATGTTCAATCCTATTCAGCCATGGCACTGATGGAAATCACAGCTGTAGCAGAGCAAAATGTAGACTTAAGGCGATCGGCTTTCAAGCCCACTTCCCATACTGCCCGAGCTGTTGTTGATCAGATGTTGAAAATTATTGAGAAGGCAGAATCAGATCTTCTCATACCATGCATTAGATCTATTGGGCACTTAGCAAGGACATTCAGAGCAACGGAGACTCGATTGATTCCACCACTGGTGAAACTGCTTGATGAAAGGGAACCAGAAGTTTCAATGGAGGCAGCGATTGCGCTTAACAAGTTTGCATGCCCAGAAAACTTTCTCAACGTTATTCACTGCAATTCAATTATCAATGCTGGGGGTGCAAAGCATTTAATTCAACTGGTTTATTTTGGTGAACAAATTGTTCAAATTCCAGCTTTGATTCTTTTGTGTCATATTGCATTACATGTTCCTACAAGGGAGACACTTGCACAAGAAGAGGTCCTTATAGTACTTGAGTGGTGCTCAAAGCAGGCACATCTCATGGAAGAACCTGACATGGAGGCACTGTTAGCAGAGGCAAGAAGTAGTTTGGATCTCTATCAGTCAAGGGGTACAAGAGGATTCCGTTGA 1875 0.4432 MASIVSSLLARPIQMADQVTKGADGAQNFKQDCLELKAKTEKLAELLRQAARSSSELYERPTRRIIDDTEQVLEKALTLITKCCANGMRRLFTIIPTAAFRKTSMQLENSIGDLHWLLRVSASADDRDDEYLGLPPIAANEPILCLIWEQIAILLSADSLEERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGNHEGQENAARAVGLLGSDPENVEHIVNAGACSVFTKILKDGDMKIQLVVAWAISEMAGNHPKCQDHFAQNNAIRLLVSHLAYGTIQEHSKYALVNKKKMSSDNTNSETYVTNVPHHIGYQGNNHIHNVILNTMEMKNQAPGQHINPTKSNNNNPKKTQISVGAPSIKGRELEDSGSKAEMKAMAAKALWQLARGNASICRSITESKALLCFAVLLEKGLEDVQSYSAMALMEITAVAEQNVDLRRSAFKPTSHTARAVVDQMLKIIEKAESDLLIPCIRSIGHLARTFRATETRLIPPLVKLLDEREPEVSMEAAIALNKFACPENFLNVIHCNSIINAGGAKHLIQLVYFGEQIVQIPALILLCHIALHVPTRETLAQEEVLIVLEWCSKQAHLMEEPDMEALLAEARSSLDLYQSRGTRGFR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00330 624 MobiDBLite consensus disorder prediction 341 360 - -
Pte14g00330 624 Pfam Armadillo/beta-catenin-like repeat 218 257 IPR000225 GO:0005515
Pte14g00330 624 Pfam Armadillo/beta-catenin-like repeat 183 213 IPR000225 GO:0005515
Pte14g00330 624 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 230 IPR000225 GO:0005515
Pte14g00330 624 Gene3D - 449 598 IPR011989 -
Pte14g00330 624 Gene3D - 148 316 IPR011989 -
Pte14g00330 624 Gene3D - 370 448 IPR011989 -
Pte14g00330 624 FunFam Armadillo repeat only 2 149 316 - -
Pte14g00330 624 Gene3D - 6 120 IPR036537 GO:0007166
Pte14g00330 624 SUPERFAMILY ARM repeat 149 587 IPR016024 -
Pte14g00330 624 Coils Coil 36 56 - -
Pte14g00330 624 PANTHER ARMADILLO REPEAT ONLY 4 1 620 - -
Pte14g00330 624 SMART arm_5 351 393 IPR000225 GO:0005515
Pte14g00330 624 SMART arm_5 218 258 IPR000225 GO:0005515
Pte14g00330 624 SMART arm_5 483 523 IPR000225 GO:0005515
Pte14g00330 624 SMART arm_5 395 435 IPR000225 GO:0005515
Pte14g00330 624 SMART arm_5 176 217 IPR000225 GO:0005515
Pte14g00330 624 SMART arm_5 529 569 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00330 Pte-Chr14 15017610 15019484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00330 155 286 U-box Gene Family AT1G71020 31.343 6.14e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00330 - - qsa:O6P43_002104 922.924