Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00312 ATGGAGGAACAACTTTCCTCTAGCCAAGATATTGCAAAACCAAACCCCACCAGTAGTACAAGATTAAAGCTCTTTGGGTTTGATGTCCAAGAAGACATAGAAGATGAAACAGTAATCATTGAAGAAGTTGCAGACTCCGGAGGTGGAGGCAGCGGTTCTGTTCCTTCTTCTTCTTCAGGTGAGAGAAAGTTTGAGTGTCACTACTGTTGCAGAGAGTTTGCTAATTCACAAGCACTTGGTGGCCATCAAAACGCTCACAAGAAAGAGCGTCAGCAGCTCAAGCGTGCTCAGCTACAAGCCACGCGAAACGCTGCGGTTTCCTTTGTCCAAAATCCTATGATCTCTGCCTTTGCCCCACCACCCCATCTGTTGGCTCAACCAGGTTCAATGGTGGTTCCCGTGTCTCACCCATCGTGGGTATACATGCATTCACGTGTCGCTCAGGCACCTTTGCACGTGTCACATGGTTGCGCTTTCCCTATGGCACATAGCGGAGGGAGGTCTGCGGGTGCAGGAATCTTTACTTACGGCGGCAGTGTAGGGGATTCCACAATTGCCTATTCAACAATGGAAACACAAGCACAAGATCCGGGTCGTGAAAGACTTAATGGGCCGTCAGTCAGTAGGTTTCCTAGAGGAGATAGTGGGCCCAATATTGATGACGCATTGGGCTTGGACTTGCATCTCAGTCTTGCGCCAGCTGGACCATAG 711 0.4951 MEEQLSSSQDIAKPNPTSSTRLKLFGFDVQEDIEDETVIIEEVADSGGGGSGSVPSSSSGERKFECHYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVQNPMISAFAPPPHLLAQPGSMVVPVSHPSWVYMHSRVAQAPLHVSHGCAFPMAHSGGRSAGAGIFTYGGSVGDSTIAYSTMETQAQDPGRERLNGPSVSRFPRGDSGPNIDDALGLDLHLSLAPAGP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00312 236 MobiDBLite consensus disorder prediction 191 219 - -
Pte14g00312 236 Gene3D Classic Zinc Finger 53 113 - -
Pte14g00312 236 PANTHER ZINC FINGER PROTEIN 5 8 235 IPR044299 GO:0010090
Pte14g00312 236 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Pte14g00312 236 MobiDBLite consensus disorder prediction 1 23 - -
Pte14g00312 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Pte14g00312 236 FunFam Zinc finger protein 6 53 114 - -
Pte14g00312 236 SUPERFAMILY beta-beta-alpha zinc fingers 60 91 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00312 Pte-Chr14 12063548 12064258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00312 17 235 C2H2 Transcription Factor Family AT1G68360 47.368 1.51e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00312 - - gmx:102663095 270.011