Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00311 ATGGGTTCTCAGATGGAAGGTCCATCTGCACCAGTAATTCGAAAAGACCCTTATGAGGTTTTGGGCGTTTCAAGGGATTCAACTGATCAGGAAATCAAAACAGCTTACAGAAAACTCGCCCTCAAATATCATCCGGATAAGAATGGCAGCAATCCAGAGGCGTCAGAATTATTCAAAGAGGTTGCTTATTCTTATAGCATCTTATCTGATCCAGAGAAGAGACGGCAGTATGACATTGCAGGTTTTGAGGCACTTGACGCTGATGGCATAGACATGGAAATTAACCTGTCAAATCTTGGCACTGTCAATACAATGTTTGCAGCTCTATTCAGCAAGCTGGGTGTTCCCATCAAGACCACCATCTCAGCAAATGTGCTTGATGAAGCTCTTAATGGAACTGTTACTGTTAGACCTCTTCCAATCGGAACATCAGTTAGTGGAAAGGTAGACAAACAATGTGCACATTTCTTTGGGGTAACAATAAATGAGCAGCAAGCTGAATCAGGGATTATAGTAAGAGTAACTTCGTCTGCCCAAAGCAAATTCAAGTTGCTCTATTTCGAACAAGAAGCAAATGGTGGTTATCATTTGGCAATACAGGAAGATAGTGAGAAGACTGGTAAAGCTACTTCAGCAGGAATGTACTTCTTACATTTTCAAGTTTACAGAATGGATGCAACTGTCAATGCGTTGGCAATGGCTAAAGATCCTGAAGCTGCATTCTTTAAAAGGTTGGAAGGCCTCCAACCTTGTGAAGTCTCCGAACTTAAAGCTGGGACTCATATATTTGCTGTTTATGGAGACAACTTCTTCAAGACAGCAACATACACAATTGAGGCTATTTGTGCAAAGTCATACGAGGAAACAACTGAAAAACTTAAAGATATTGAGGCCCAAATATTAAGAAAGAGGAATGAGCTCCGCCAGTTTGAGACAGAATATAGAAAGGCGTTAGCACGCTATCAAGAAGTGACTGAAAGATATGCCAAAGAAAAGCTATCGGTCGATGAACTTCTAAGACAGAGAGATAGTGTCCACTCACTTTTCACGGTTTTAAACACAGTTAATGCAAGTGCTAGTAACTTAAGTAATGGCAGTACTAGCAAAGTTTCTGGTGAAGATTCCAAAGCTGAGAGCCCTATAGACGATGGAAGTTCTGATACCAAAGACAAATCAGGAAAAAAGAAATGGTTTAACCTCAATCTCAGGGGCTCTGATAAGAAGTTAGGCTGA 1233 0.4079 MGSQMEGPSAPVIRKDPYEVLGVSRDSTDQEIKTAYRKLALKYHPDKNGSNPEASELFKEVAYSYSILSDPEKRRQYDIAGFEALDADGIDMEINLSNLGTVNTMFAALFSKLGVPIKTTISANVLDEALNGTVTVRPLPIGTSVSGKVDKQCAHFFGVTINEQQAESGIIVRVTSSAQSKFKLLYFEQEANGGYHLAIQEDSEKTGKATSAGMYFLHFQVYRMDATVNALAMAKDPEAAFFKRLEGLQPCEVSELKAGTHIFAVYGDNFFKTATYTIEAICAKSYEETTEKLKDIEAQILRKRNELRQFETEYRKALARYQEVTERYAKEKLSVDELLRQRDSVHSLFTVLNTVNASASNLSNGSTSKVSGEDSKAESPIDDGSSDTKDKSGKKKWFNLNLRGSDKKLG* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00311 410 Pfam DnaJ domain 16 78 IPR001623 -
Pte14g00311 410 SMART dnaj_3 15 73 IPR001623 -
Pte14g00311 410 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
Pte14g00311 410 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pte14g00311 410 MobiDBLite consensus disorder prediction 361 395 - -
Pte14g00311 410 MobiDBLite consensus disorder prediction 375 395 - -
Pte14g00311 410 CDD DnaJ 16 70 IPR001623 -
Pte14g00311 410 Gene3D DnaJ domain 9 95 IPR036869 -
Pte14g00311 410 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 408 - -
Pte14g00311 410 Coils Coil 286 341 - -
Pte14g00311 410 PRINTS DnaJ domain signature 18 36 IPR001623 -
Pte14g00311 410 PRINTS DnaJ domain signature 36 51 IPR001623 -
Pte14g00311 410 PRINTS DnaJ domain signature 73 92 IPR001623 -
Pte14g00311 410 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pte14g00311 410 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Pte14g00311 410 FunFam Chaperone protein dnaJ 16 2 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00311 Pte-Chr14 12045907 12053087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00311 18 88 C2H2 Transcription Factor Family AT1G74250 44.737 2.17e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00311 - - cave:132184178 702.205