Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00301 ATGGTGTGCTTAGATTACCTCCTAGATTCAGGCGATCTGGAGCAAGAAAGGTACTTCTTCAGCACATGGGAGGCCAAATATCCCAATGGGAATCGATCCAACAGAGCCACAGGTTCTGGTTACTTGAAGGCAACAGGATTGGACAAGCAAATTGTTACCTCAAAGAGTAACCATGTTGTTGGGATGAAGACGACTTTGGTTTTCTACAGAGGCAAACCACCTCATGGCTGA 231 0.4589 MVCLDYLLDSGDLEQERYFFSTWEAKYPNGNRSNRATGSGYLKATGLDKQIVTSKSNHVVGMKTTLVFYRGKPPHG* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00301 76 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 76 - -
Pte14g00301 76 Gene3D NAC domain 5 76 IPR036093 GO:0003677|GO:0006355
Pte14g00301 76 SUPERFAMILY NAC domain 14 76 IPR036093 GO:0003677|GO:0006355
Pte14g00301 76 ProSiteProfiles NAC domain profile. 1 76 IPR003441 GO:0003677|GO:0006355
Pte14g00301 76 Pfam No apical meristem (NAM) protein 14 73 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00301 Pte-Chr14 11668744 11670004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00301 11 76 NAC Transcription Factor Family AT5G13180 78.788 1.84e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte14g00301 NAM 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00301 - - gmx:100170709 124.79