Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00267 ATGCCCGCAATTCCAACCAAATCTTTCTTCTGCCATCATTGTCAAGTCGTTTTCTTCCTCCCTCTCATTTATGTTGCTTCATCTAGACCATTTTGCCCAAACTGCAATGGGGACTTCCTCCAAGAACAGCTCAACCCTAGCCGTCCATCTCTGCCAACAACAGCAACAGTAGAATACAGTCATCCCATATTCAACAATTCCCCTTCCGTCTCATTACCTTTCTCTTCAACTCATACCCCATCAAGCTTCTCTATGAATCTTATACGACAAGCATTGATAGATGCTGATCATAATGATGATGATGAATATGGCAGTCTAGCAGCATCCACTGTTGCTTTCCTGAATCTTCCAACTCGTACAGTTACTGAGGGAATGATGTACTCTAATGAATTCAAACAATGTATGATTTGTTTAGGTGAGAATCAAATGGGGAATGAGGTCAAAGAAATGCCATGCAAGCATGTGTTCCATTGCTCATGCCTTTCCCCATGGCTTCAGTTGCATAACTCTTGTCCTATATGCCGATTTCAACTACCAAAGGATGGTGAGATGGATTATGATGATGTGGATGGTGATGAAGACACCTTCAGTCTAGGGTCTTTGCTTGGTGATGATGAAGACATGGATCTCAGTGATAACCAAGATGATTCTGATTGA 657 0.4201 MPAIPTKSFFCHHCQVVFFLPLIYVASSRPFCPNCNGDFLQEQLNPSRPSLPTTATVEYSHPIFNNSPSVSLPFSSTHTPSSFSMNLIRQALIDADHNDDDEYGSLAASTVAFLNLPTRTVTEGMMYSNEFKQCMICLGENQMGNEVKEMPCKHVFHCSCLSPWLQLHNSCPICRFQLPKDGEMDYDDVDGDEDTFSLGSLLGDDEDMDLSDNQDDSD* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00267 218 FunFam E3 ubiquitin-protein ligase RNF181 96 181 - -
Pte14g00267 218 MobiDBLite consensus disorder prediction 185 218 - -
Pte14g00267 218 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 71 179 - -
Pte14g00267 218 SMART ring_2 134 174 IPR001841 -
Pte14g00267 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 181 IPR013083 -
Pte14g00267 218 Pfam Ring finger domain 133 175 IPR001841 -
Pte14g00267 218 ProSiteProfiles Zinc finger RING-type profile. 134 175 IPR001841 -
Pte14g00267 218 SUPERFAMILY RING/U-box 117 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00267 Pte-Chr14 10726335 10727266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00267 133 193 C3H Transcription Factor Family AT1G26800 50.000 8.29e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00267 K11982 - pop:7456300 109.768