Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte14g00267 | ATGCCCGCAATTCCAACCAAATCTTTCTTCTGCCATCATTGTCAAGTCGTTTTCTTCCTCCCTCTCATTTATGTTGCTTCATCTAGACCATTTTGCCCAAACTGCAATGGGGACTTCCTCCAAGAACAGCTCAACCCTAGCCGTCCATCTCTGCCAACAACAGCAACAGTAGAATACAGTCATCCCATATTCAACAATTCCCCTTCCGTCTCATTACCTTTCTCTTCAACTCATACCCCATCAAGCTTCTCTATGAATCTTATACGACAAGCATTGATAGATGCTGATCATAATGATGATGATGAATATGGCAGTCTAGCAGCATCCACTGTTGCTTTCCTGAATCTTCCAACTCGTACAGTTACTGAGGGAATGATGTACTCTAATGAATTCAAACAATGTATGATTTGTTTAGGTGAGAATCAAATGGGGAATGAGGTCAAAGAAATGCCATGCAAGCATGTGTTCCATTGCTCATGCCTTTCCCCATGGCTTCAGTTGCATAACTCTTGTCCTATATGCCGATTTCAACTACCAAAGGATGGTGAGATGGATTATGATGATGTGGATGGTGATGAAGACACCTTCAGTCTAGGGTCTTTGCTTGGTGATGATGAAGACATGGATCTCAGTGATAACCAAGATGATTCTGATTGA | 657 | 0.4201 | MPAIPTKSFFCHHCQVVFFLPLIYVASSRPFCPNCNGDFLQEQLNPSRPSLPTTATVEYSHPIFNNSPSVSLPFSSTHTPSSFSMNLIRQALIDADHNDDDEYGSLAASTVAFLNLPTRTVTEGMMYSNEFKQCMICLGENQMGNEVKEMPCKHVFHCSCLSPWLQLHNSCPICRFQLPKDGEMDYDDVDGDEDTFSLGSLLGDDEDMDLSDNQDDSD* | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte14g00267 | 218 | FunFam | E3 ubiquitin-protein ligase RNF181 | 96 | 181 | - | - | |
Pte14g00267 | 218 | MobiDBLite | consensus disorder prediction | 185 | 218 | - | - | |
Pte14g00267 | 218 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 71 | 179 | - | - | |
Pte14g00267 | 218 | SMART | ring_2 | 134 | 174 | IPR001841 | - | |
Pte14g00267 | 218 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 181 | IPR013083 | - | |
Pte14g00267 | 218 | Pfam | Ring finger domain | 133 | 175 | IPR001841 | - | |
Pte14g00267 | 218 | ProSiteProfiles | Zinc finger RING-type profile. | 134 | 175 | IPR001841 | - | |
Pte14g00267 | 218 | SUPERFAMILY | RING/U-box | 117 | 181 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte14g00267 | Pte-Chr14 | 10726335 | 10727266 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte14g00267 | 133 | 193 | C3H Transcription Factor Family | AT1G26800 | 50.000 | 8.29e-17 | 73.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte14g00267 | K11982 | - | pop:7456300 | 109.768 |