Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00253 ATGGGGAAATCAAGCAAAAAGTCTATTGCTAAAATTGATGCAGCTCCTGCTGTTTTACCGTCCACCAAGCCCATAAAGAAGGGTAAAAGGGGAGCTGAAAATGATTTGCCAAAGCAAGTTAGTTCAAAAAAGCAGAAGAGAGATGACAATGCTGAACAGATTGTTCAGAAGAAAAAGATGGAAGCGAAGAAGCAAAACATCAAAGAAGAAAGTTCTGATGACTCATCCTCGGAATCTGAGGAGGAGAAACCTGTGGCAAAAAAAGTCGTTACTCCAAAGAAACAGACTACAAGTGCCCCTCCACCAAAGGGAAAACCAACCAGTGATTCAGATTCCTCTTCAGATGATGACTCAGATGATTCAGATGAGGATAAAGTCCCACAAACCAAGAAAGTACCTACTGTTTCTGCTAAGAATGGATCTGCTTCTCAGAAGAGAAAAGATGATTCAAGTGACAGCTCAGAATTGGAGGATTTGAAAAAGAGCAAAGCCGTTTCCAAGAAGTTGCCTGTTAAGAAGGTTGAATCAACTGATGACGACAGCAGTTCTGATGATGATGATGATGAAAAGACCAATGCACCTGCAGCATCTAACAAAAAGGTGCCCGCTAATGGAGCAAAGAAGGGAATTCCATTGAAGAAATCTGAAACAAGTGAAAGCTCTGGGGAAGACACGAGTGACAGCTCTGATGACGACCATGGTAAAGCTCACTTGACTAAGAGTGTGCCTTCTGTTGCTGCAAAGAAGAAAGCTGAATCTAGTGAGAGCTCCGATTCTGATGACAGCTCTGATGATGACAGTGAAGAGAACGTGAAGGCCCCCACTCAAGCCAAGATCAGTGCACCTGCTCCTAAAACTACCCCTGTGGCTTCCAAAAAGCAGCCCGAGTCCAGTGATGATGACTCGAGTGATGATGAAAGCAGTTCTGATGATGATGTGAAAGCCCCTGCTGCCAAGACTAGTGCACCTGCTCCTAAAACTACCCCTGTGGCTTCCCAAAAGAAGCCCGAGTCCAGTGATGATGACTCGAGTGATGATGAAAGCAGTTCTGATGATGAGCCGAAGAATGCAAAGGTTTCTAGTGGTACTAAAAAGATTGCAAATGAAGAAAGCAGTGAAAGTTCAGATGAGGACAAAATGGAAGTTGATGACAATAGTTCAGAATCTGATGATGAGCTAGATATTAAACAACAGACTGCAGCTGCTCCCAAGACTGAAATAAAGAGAGCAACTTCTGCCTCCAAAGACAGCGATAGTTCAGAAGATGACGACGACTCTGATGACGACTCTGATAAGCCTTCCAAGCCGTTGGAAAATTCAAAGAACAGCAGCAGTGATTCAGATGAGAGTTCTGAGGATGACGAGGACACTCCTTCAAAACCTGCCAAGAATGCTGCCAAGGATGTTGAGATGGCTGATGTTGTATCACCACAGGCCAAATCTGACAAGAAATCTTTGCAATCCCCTGCTACTCCGAAAGTGGAAGGATCCTCGGGAAAGACTCTCTTTGTTGGAAACTTATCGTATAGTGTTTCAGAAGATGATGTGGTAAACTTCTTCAAAGATTCTGGAGAAGTTGTGCATGTTCGTTTAGCTAGTGCTACTGATGGAAGGTTCAGGGGGTTTGGACATGTGGAATTTGCGAATGCAGAGGCAGCAAAAAAAGCTCTTTCCCTGAATGGAATGGAGTTGCTTAGTCGTCCAGTGAAACTTGACATTGCCGCTGAAAGGGGTGCATACACTCCGCATGCCAGCAGCAACAATAGTAACTCTTTCCAGAAAGGCCAGGCTCATACTGTGTTTGTGCGTGGGTTTGATACATCCCTCGGGGAGGATGAGGCAAGAAGCAGCCTTCGAGAATTGTTTAGTTCCTGTGGAGAGATTAGCAGGATATCTGTCCCAAAAAATTTTGATTCTGGTGAAATAAAAGGGTTTGCTTATCTGGATTTCAATGATGCTGATAGTTTCAATCAGGCACTAGAACTTAATGGATCTGACCTTGGGGGTTTCTCAATCCATGTGGATGAAGCAAAACCACGAGGAGACAGTCAATCAGGAGGTGGTAGAGGCGGTTTTGGCCGGAGTGGTGGTAGAGGAAGTGGCAGAGATGGTGGTGGCCGATTTAGTGGAGGACGTGGAGGCAGAGGTGGAGGTGGTCGTGGAGGACGTGGGACAGCTGGCAAGCCAAGTCTTGCAGCTCCTGGGACAGGGACAAAGACTACTTTTGCAGATGAAGATTAG 2241 0.452 MGKSSKKSIAKIDAAPAVLPSTKPIKKGKRGAENDLPKQVSSKKQKRDDNAEQIVQKKKMEAKKQNIKEESSDDSSSESEEEKPVAKKVVTPKKQTTSAPPPKGKPTSDSDSSSDDDSDDSDEDKVPQTKKVPTVSAKNGSASQKRKDDSSDSSELEDLKKSKAVSKKLPVKKVESTDDDSSSDDDDDEKTNAPAASNKKVPANGAKKGIPLKKSETSESSGEDTSDSSDDDHGKAHLTKSVPSVAAKKKAESSESSDSDDSSDDDSEENVKAPTQAKISAPAPKTTPVASKKQPESSDDDSSDDESSSDDDVKAPAAKTSAPAPKTTPVASQKKPESSDDDSSDDESSSDDEPKNAKVSSGTKKIANEESSESSDEDKMEVDDNSSESDDELDIKQQTAAAPKTEIKRATSASKDSDSSEDDDDSDDDSDKPSKPLENSKNSSSDSDESSEDDEDTPSKPAKNAAKDVEMADVVSPQAKSDKKSLQSPATPKVEGSSGKTLFVGNLSYSVSEDDVVNFFKDSGEVVHVRLASATDGRFRGFGHVEFANAEAAKKALSLNGMELLSRPVKLDIAAERGAYTPHASSNNSNSFQKGQAHTVFVRGFDTSLGEDEARSSLRELFSSCGEISRISVPKNFDSGEIKGFAYLDFNDADSFNQALELNGSDLGGFSIHVDEAKPRGDSQSGGGRGGFGRSGGRGSGRDGGGRFSGGRGGRGGGGRGGRGTAGKPSLAAPGTGTKTTFADED* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00253 746 MobiDBLite consensus disorder prediction 480 499 - -
Pte14g00253 746 MobiDBLite consensus disorder prediction 673 746 - -
Pte14g00253 746 Gene3D - 582 729 IPR012677 -
Pte14g00253 746 MobiDBLite consensus disorder prediction 26 89 - -
Pte14g00253 746 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 598 679 IPR000504 GO:0003723
Pte14g00253 746 SMART rrm1_1 501 572 IPR000504 GO:0003723
Pte14g00253 746 SMART rrm1_1 599 675 IPR000504 GO:0003723
Pte14g00253 746 SUPERFAMILY RNA-binding domain, RBD 489 583 IPR035979 GO:0003676
Pte14g00253 746 MobiDBLite consensus disorder prediction 91 108 - -
Pte14g00253 746 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 610 673 IPR000504 GO:0003723
Pte14g00253 746 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 502 569 IPR000504 GO:0003723
Pte14g00253 746 MobiDBLite consensus disorder prediction 1 499 - -
Pte14g00253 746 SUPERFAMILY RNA-binding domain, RBD 595 706 IPR035979 GO:0003676
Pte14g00253 746 CDD RRM2_NUCLs 599 677 IPR034350 -
Pte14g00253 746 MobiDBLite consensus disorder prediction 212 238 - -
Pte14g00253 746 MobiDBLite consensus disorder prediction 142 179 - -
Pte14g00253 746 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 500 576 IPR000504 GO:0003723
Pte14g00253 746 MobiDBLite consensus disorder prediction 374 390 - -
Pte14g00253 746 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 599 723 - -
Pte14g00253 746 Coils Coil 50 70 - -
Pte14g00253 746 Gene3D - 476 581 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00253 Pte-Chr14 10468078 10473976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00253 501 674 Eukaryotic Initiation Factors Gene Family AT4G34110 27.119 1.06e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00253 K11294 - jre:108998139 407.912