Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00187 ATGAAGAGAAGCAGAGACGACGTTTGCAACCTCAAGCGACCTGTTGTGCCTTTTCGAGGCGAAGGCTCGGCGCAACCTCAGATGACGGAAGGAGGTAATCAGAAACTAACAACAACCGATGCCTTAGCCTACCTCAAGGCTGTCAAGGATATGTTTCAAGATAGAAGGGAAAAATATGATGACTTTTTGGAAGTTATGAAAGATTTCAAGGCTCAAAGAATTGACACTGCCGGTGTCATCACAAGGGTGAAAGAATTGTTTAAAGGGCATCGAGAATTAATATTGGGGTTCAATACCTTCTTGCCAAAGGGATATGAGATAACTCTTCCACCAGAGGATGAACAACCTTCACAAAAGAAGCCTGTGGAATTTGAAGAAGCTATCAATTTTGTTAACAAAATTAAGACGCGGTTTCAGGCTGATGATCATGTATACAAATCATTTTTAGACATTTTGAACATGTACAGGAAGGAAAACAAGTCTATTACGGAAGTCTACGAGGAGGTTGCCACACTTTTCCAAGACCACCGGGACCTTCTTGCTGAATTTGCTCATTTTCTCCCTGAGAATTCAGGAACCTCCACGCATCATGCTCAACCTGTCCGAAACTCTGTCCTCCGAGATAGGAGCTCCCCAATACCCAAAATGCGGCAAATACATGTTGACAAGAAAGATAGGACTATGACTTTGCATGGAGAACGGGACATTAGTGTTGACTGTCCTGATCCAGACCTTGACAAAAATTTGACAAGGGCAGATAAAGAGCAGCGAAGGCACGCTGAAAGGGAAAAGGATAGGAGGGAAGACAGGGAGAGGAGAGAATGGAATAGGGAGTATAGGGATTATGAGCATGATAGTAGTCCAGATTTTGATGTTCGATTCCCTCACAAGCGGAAATCTAACCATAAAGCCAATAACTTTGCTTCTGAACCTGGTGGAGATTGTGATAAGAACTTTGACATACGTCCTCCATCCTCCTCTATGGACGAGAAAAATTCTGTGAAAAGTATGTATAGACAAGAATTTGCATTTTGTGAGAAAGTGAAGGAAAAATTACGAAATCCTGAAGATTACCGAGAATTTTTGAAGTGCCTCCATATTTATAGTAGGGAAATTATAACCCGAACTGAGTTGCAGACGCTGGTGGGTGATTTGCTGGGTAAGTATGCAGATCTTATGAGCGGATTTACTGAATTTTTGGCACAGTGTGAAAAGCATGATGGATTCCTTTCTGGTGTCATGAGTAAAAAATCAATGTGGAGTCAAGGGTCTCACAAAACAGTGAAGGTTGAGAATAGGGACAGAGATCGTGATAGGGATGACGGTGTAAAAGAAAGAGATTGTGAAACACGAGAAAGAGACAGACTTGAAAGAAATATTGTATATCCTAGTAAGGATGGCTCTGGTCATAGGATGTCTTTGTTTTCCAGTAAGGATAAATACTTGACAAAACCCATACAAGAACTGGACCTATCCAATTGTGAGAGTTGCACTCCTAGTTATCGTCTGCTTCCAAAAAATTATCCAATGCCTATGGCTAGTCAGAGAACGGATCTTGGTGCCAATGTCCTGAATGATCACTGGGTGTCTGTGACTTCAGGAAGTGAGGATTACTCTTTTAAACACATGCGCAAAAACCAGTATGAAGAAAGCTTGTTTCGATGTGAAGATGACAGGTTTGAGCTAGATATGTTGTTAGAGTCTGTGAATGTGACAATCAAGCGGGTAGAGGACTTGTTAGAGAAGATCAACAATAATACAATTAAAGCAGACACTCCAATTCGTATTGAGGAGCATTTCACAGCACTAAATGTGAGGTGCATTGAGAGACTATATGGTGACCATGGGCTTGATGTTATGGATGTGTTGAAGAAGAATGCGCATCTAGCTTTGCCAGTTATATTGACCCGTCTGAAGCAGAAGCAAGAGGAGTGGGCAAAATGTCGTTATGAATTTAATAAAGTTTGGGCTGAAATATATTCTAAAAACTACCACAAATCCCTTGATCATCGTAGTTTCTACTTTAAGCAGCAGGACACTAAGAGCTTGAGTACAAAAGCCTTGCTTTCTGAAATTAAAGAAATCAGTGAAAAGAAGTGCACAGATGATGATGATGATGCACTTCTTGCCATTTCTGCTGGAAATAGACGACCTACCATTCCAAATCTGGAATTCGACTACCTTGATCCTGACGTTCATGAAGATTTATATCAGCTCATCAAATATTCTTGTGGGGAAGTTTTTACAGCAGAACAATTGGATCAAGTGATGAAGGTTTGGACAACCTTCCTTGAACCCATGCTTGGTGTGCCTCCTCATTCCCAGGGTGCAGAGGATACAGAAGATGTTGCAAAGGCCCAAAGTGCTGGAGAGAGTGATGGTAGTCCTGGTTGGGATGCTGTAGCCGTGAAGCCCAAACAATCAAATACCCCCAGAATTGTAGAGGAAAATGTTCTTCCAGAACAATCAAGTTCTTCTAAGGGTTGGCACACAAATGGGCACAACATAAATGAAGACAGTCGTCGAGATGTAGCTCATAATAGCTGCAAGAGTGGAGCTGTAAGCAACGATGTACACCTTGGTAACGTGGAAATTAATGGATCTACAGCTGACGTGTCAGGATCTCACAAGCAAGAACATTCTAATGAGAGGATAGTGAATGCCAATGCACTGTTAGCCTCTGCAGTGGAGCAAAGCAATGGAAAAACTAACAAAGAAAACGTATCAGGATTAGGGTCTACTCCCTCTAGAGCTGGTATGGTCTCTGTTGAGCGTGCTCCTGATTTACCTTCATCAGATGGTTGTGATTCTACAAAACCATCAACAAATGGGGTGGAGGTCGGTGGGACCAAAAGTCATAGGTATGAAGATGACGCTGTTGGACACTCCAAAAGTGAAAGAGAAGAGGGTGAATTATCTCCTAATGGAGATTTTGAGGAAGACAACTTTGCAGCTTATAAGGATGGTGGATTGGAGGCTCTACATAAATTGAAGGAGGCTAGCACTACACAGTACCAGAGCAGGCATGGGGATGAAAAAGTTTGTTGTGGTGAGGCTAGAGGAGAGAATGAGGCTGATCCGGACGATGAGGGTGAAGAAAGTGCTCATCGATCATCAGAGGACAGTGAAAATGCTTCTGAGAACGGTGAAATATCTGGATGTGAGTCTGCTGATGGTGAAGATTGTTCTCGAGAGGAGAACGAGGAGGATGAGGACCATGAGGTACATGATAATAAGGTCGAGAGTGAAGGTGAAGCAGAGGGAATGGCCGATGCCAATTATGTTGAAGGGGATGGCACGTCATTAACACGTTCACAATGCTTTCTACATACCGCAAAGCCTCTGGCAAAGCATGTCTCTACAGTATTGCAGGAGAAAGAGAAGAATAGAGTATTTTATGGAAATGACTCCTTTTACGTGCTTTTTAGGCTCCATCAGACATTATATGAAAGAATACAATCTGCAAAGATTAACTCTTTATCCAGTGAAAGGAAGTGGAGGACTTCAAATGATGCGGGCTCTACTGACCTCTATGCCAGATTTATGAGTTCCCTTTACAATTTACTTGACGGTTCATCTGACAACACAAAATTTGAGGATGATTGTCGAGCTATTATTGGAACTCAATCATATGTCTTGTTCACGTTGGACAAGTTGATATACAAACTCATTAAACAGCTTCAATCTGTTGCTTCTGAGGAGATGGACAACAAGCTTCTTCAACTCCATTCTTATGAGAAATCCAGGAAAGCTGAAAGATTTGTAGACGTAGTTTATTATGAAAATGCCCGTGTTGTCCTTCATGACGATAATATATATCGAATTGAATGTTCATCCTCACCAGCCCGATTGTCTATTCAGCTTATGGACAATGGACATGACAAGCCAGAAGTTACTGCCGTGTCCATGGATCCTAATTTTTCAGCTTATCTACATAATGATTTCCTCTCAATTGTTCCCGAGAAGGAGAAATCCGGGATTTTCTTGAATAGGAACAAACGTAAATATAGTTGTGTTGATGAAATTTCAATTGAGGCCATGGAAGGACTGCAAATTGTCAATGGTCTGGAATGCAAGATAGCTTGTAATTCGTCCAAGGTTTCATATGTCTTAGATACAGAAGATTTTTTGTTCCGAACAAAAAGGAAAAGCCAAACTTTACGGCGCAGTTCATGCCAGGAACCAGCAAAGTTTTCAAAAATTTCTTTAAGTCGATTGCAGCAGTTTCAGAGATTGTTTTGCACACCATAA 4251 0.4154 MKRSRDDVCNLKRPVVPFRGEGSAQPQMTEGGNQKLTTTDALAYLKAVKDMFQDRREKYDDFLEVMKDFKAQRIDTAGVITRVKELFKGHRELILGFNTFLPKGYEITLPPEDEQPSQKKPVEFEEAINFVNKIKTRFQADDHVYKSFLDILNMYRKENKSITEVYEEVATLFQDHRDLLAEFAHFLPENSGTSTHHAQPVRNSVLRDRSSPIPKMRQIHVDKKDRTMTLHGERDISVDCPDPDLDKNLTRADKEQRRHAEREKDRREDRERREWNREYRDYEHDSSPDFDVRFPHKRKSNHKANNFASEPGGDCDKNFDIRPPSSSMDEKNSVKSMYRQEFAFCEKVKEKLRNPEDYREFLKCLHIYSREIITRTELQTLVGDLLGKYADLMSGFTEFLAQCEKHDGFLSGVMSKKSMWSQGSHKTVKVENRDRDRDRDDGVKERDCETRERDRLERNIVYPSKDGSGHRMSLFSSKDKYLTKPIQELDLSNCESCTPSYRLLPKNYPMPMASQRTDLGANVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTIKRVEDLLEKINNNTIKADTPIRIEEHFTALNVRCIERLYGDHGLDVMDVLKKNAHLALPVILTRLKQKQEEWAKCRYEFNKVWAEIYSKNYHKSLDHRSFYFKQQDTKSLSTKALLSEIKEISEKKCTDDDDDALLAISAGNRRPTIPNLEFDYLDPDVHEDLYQLIKYSCGEVFTAEQLDQVMKVWTTFLEPMLGVPPHSQGAEDTEDVAKAQSAGESDGSPGWDAVAVKPKQSNTPRIVEENVLPEQSSSSKGWHTNGHNINEDSRRDVAHNSCKSGAVSNDVHLGNVEINGSTADVSGSHKQEHSNERIVNANALLASAVEQSNGKTNKENVSGLGSTPSRAGMVSVERAPDLPSSDGCDSTKPSTNGVEVGGTKSHRYEDDAVGHSKSEREEGELSPNGDFEEDNFAAYKDGGLEALHKLKEASTTQYQSRHGDEKVCCGEARGENEADPDDEGEESAHRSSEDSENASENGEISGCESADGEDCSREENEEDEDHEVHDNKVESEGEAEGMADANYVEGDGTSLTRSQCFLHTAKPLAKHVSTVLQEKEKNRVFYGNDSFYVLFRLHQTLYERIQSAKINSLSSERKWRTSNDAGSTDLYARFMSSLYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLIKQLQSVASEEMDNKLLQLHSYEKSRKAERFVDVVYYENARVVLHDDNIYRIECSSSPARLSIQLMDNGHDKPEVTAVSMDPNFSAYLHNDFLSIVPEKEKSGIFLNRNKRKYSCVDEISIEAMEGLQIVNGLECKIACNSSKVSYVLDTEDFLFRTKRKSQTLRRSSCQEPAKFSKISLSRLQQFQRLFCTP* 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00187 1416 MobiDBLite consensus disorder prediction 427 446 - -
Pte14g00187 1416 SUPERFAMILY PAH2 domain 337 403 IPR036600 GO:0006355
Pte14g00187 1416 MobiDBLite consensus disorder prediction 213 273 - -
Pte14g00187 1416 Gene3D Paired amphipathic helix 118 191 IPR036600 GO:0006355
Pte14g00187 1416 MobiDBLite consensus disorder prediction 950 972 - -
Pte14g00187 1416 SUPERFAMILY PAH2 domain 117 188 IPR036600 GO:0006355
Pte14g00187 1416 Coils Coil 566 586 - -
Pte14g00187 1416 Gene3D Paired amphipathic helix 40 102 IPR036600 GO:0006355
Pte14g00187 1416 SMART hdac_interact2seq4b 493 593 IPR013194 -
Pte14g00187 1416 FunFam Paired amphipathic helix protein SIN3 332 405 - -
Pte14g00187 1416 ProSiteProfiles PAH domain profile. 120 190 IPR003822 GO:0006355
Pte14g00187 1416 PANTHER SIN3B-RELATED 33 1276 IPR039774 GO:0003714
Pte14g00187 1416 MobiDBLite consensus disorder prediction 898 916 - -
Pte14g00187 1416 ProSiteProfiles PAH domain profile. 334 403 IPR003822 GO:0006355
Pte14g00187 1416 MobiDBLite consensus disorder prediction 934 948 - -
Pte14g00187 1416 Pfam Sin3 family co-repressor 496 587 IPR013194 -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 424 446 - -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 1030 1044 - -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 818 839 - -
Pte14g00187 1416 ProSiteProfiles PAH domain profile. 34 104 IPR003822 GO:0006355
Pte14g00187 1416 FunFam Paired amphipathic helix SIN3-like protein 119 190 - -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 191 206 - -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 770 806 - -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 898 982 - -
Pte14g00187 1416 Pfam C-terminal domain of Sin3a protein 1132 1377 IPR031693 -
Pte14g00187 1416 FunFam Paired amphipathic helix protein Sin3 40 102 - -
Pte14g00187 1416 MobiDBLite consensus disorder prediction 191 273 - -
Pte14g00187 1416 Pfam Paired amphipathic helix repeat 143 187 IPR003822 GO:0006355
Pte14g00187 1416 Pfam Paired amphipathic helix repeat 356 400 IPR003822 GO:0006355
Pte14g00187 1416 Pfam Paired amphipathic helix repeat 57 101 IPR003822 GO:0006355
Pte14g00187 1416 SUPERFAMILY PAH2 domain 33 103 IPR036600 GO:0006355
Pte14g00187 1416 MobiDBLite consensus disorder prediction 818 833 - -
Pte14g00187 1416 Gene3D Paired amphipathic helix 332 405 IPR036600 GO:0006355
Pte14g00187 1416 MobiDBLite consensus disorder prediction 1019 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00187 Pte-Chr14 7343504 7352948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00187 9 139 WRKY Transcription Factor Family AT4G12020 46.970 2.46e-24 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte14g00187 Sin3a_C 1.9e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00187 K11644 - cave:132177091 1981.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00187 14 7343504 7352948 Pte14g00187 14 7343504 7352948 RCT