Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00180 ATGTCCCGCACTTGCTCTCAGTGCGGGAACAACGGCCACAACTCGCGGACTTGCAATGAAGGTATCAGCGGCAACGGTGGGGCTTCAGGCTCCGGTGAGCAACAACATGGTATCATGTTATTTGGTGTGAGAGTCACTGAAGGAGGGACATGCTTTAGGAAGAGTGCGAGTATGACGAATCTGTCTCAGTACGAACATCAGCCTCAAGATTCCAACCCTAATGCTGGATATGAATCAGATGATGTCGTTCATGCATCAGGTCGCAGCCGTGAACGCAAGAGAGGTGTGCCATGGACGGAGGAAGAACACAAGCTATTCTTGCTGGGGTTGCAGAGGGTAGGTAAAGGAGACTGGAGAGGAATATCTAGAAACTTTGTCAAGACAAGGACTCCAACCCAGGTGGCAAGCCATGCTCAGAAGTACTTTCTTCGCCGGAGTAACCAGAATCGCAGACGCCGGAGATCTAGCCTCTTCGATATGACTACTGATACATTTATGGCATCCCCTACTGTGATGGAAGAAGAAGATCCAGAGCAAGATAGATTGGTACAACAATCACAGATTAATATAACGAGTCCACATGGCTATGGAGAGTTTGCTTCTTCTTCGAATTTTCCTGTTCCAGTTACGCCCGCGATTTTACCAGAGAATCAACCACCACTGGAAAGTCTGAGATTTAACTGTACTGCCATTACTTCCAATAAGCCTATTAGGCCACTACCAATTATACCAGTTCCTCCATCATCCAAAATGGCTAATCTGAATCTGAACCAGAAATCTTCCAGTGCTGAGTCTTTGCCTTTGTCAATGAAGCTAGCAGCCTCATCAACATCATCAGATGAGAAGCCACCGCAGGCCAAGCACTCATCGGCCTTTCAAACCATATCCGGCAAGTTCGACAGCGGTGGAGACAGCATCATTACTGTAGCCTAA 933 0.4759 MSRTCSQCGNNGHNSRTCNEGISGNGGASGSGEQQHGIMLFGVRVTEGGTCFRKSASMTNLSQYEHQPQDSNPNAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQRVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNQNRRRRRSSLFDMTTDTFMASPTVMEEEDPEQDRLVQQSQINITSPHGYGEFASSSNFPVPVTPAILPENQPPLESLRFNCTAITSNKPIRPLPIIPVPPSSKMANLNLNQKSSSAESLPLSMKLAASSTSSDEKPPQAKHSSAFQTISGKFDSGGDSIITVA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00180 310 SMART sant 94 144 IPR001005 -
Pte14g00180 310 CDD SANT 97 142 IPR001005 -
Pte14g00180 310 Gene3D - 96 147 - -
Pte14g00180 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 146 IPR017930 -
Pte14g00180 310 PANTHER TRANSCRIPTION FACTOR KUA1 1 260 - -
Pte14g00180 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 93 144 IPR006447 GO:0003677
Pte14g00180 310 MobiDBLite consensus disorder prediction 257 310 - -
Pte14g00180 310 MobiDBLite consensus disorder prediction 64 96 - -
Pte14g00180 310 Pfam Myb-like DNA-binding domain 97 142 IPR001005 -
Pte14g00180 310 MobiDBLite consensus disorder prediction 257 301 - -
Pte14g00180 310 ProSiteProfiles SANT domain profile. 93 146 IPR017884 -
Pte14g00180 310 ProSiteProfiles Myb-like domain profile. 90 142 IPR001005 -
Pte14g00180 310 FunFam transcription factor MYB1R1 96 147 - -
Pte14g00180 310 SUPERFAMILY Homeodomain-like 92 146 IPR009057 -
Pte14g00180 310 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00180 Pte-Chr14 7244014 7246260 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte14g00180 Myb_DNA-binding 7.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00180 - - qsa:O6P43_025371 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00180 14 7244014 7246260 Pte14g00180 14 7244014 7246260 RCT