Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00154 ATGAGTCGTAAGCGAGACAAACCCTATTTCTCCCGCCACCCGCCTTTATACGCCGCCAAAAGGCAGCGTCCGTTGCCGCGGTCCGTCACCGTCGAAGAACCCATTGACAAGCCGACTGCTAAGCCAGCACCTCCACCAGCTGTGGTCGTCACGGGCCTACCTATGGACTGCTCTGTGCTCGACCTCAAATCCCGATTTGAGATTTATGGTTCCATCTCTCGTATCCGCATTGATCGTAGTGGAGTTGGTTATATTACTTATCGAACCAAGGAGTCGGCAGAGGTTGCCATTGCTGCTGCCCTTGACCCGTCGTTCGGTATCTCAATTGATTCCAAAAGGGTGCAAGTCTTGTGGGCTACTGATCCTCTAGCACAATGGAGAGAAGGAGTTGGTAATAAGGATAAAGGGTCTTCATCTAAGTTATTGCGTGCAGAGGTACCATTACGTAGACATGGAAGAGGAAATAAACTCGCCTCAGCCATAGTATCCCCCAAAGGTAAAGCTGATGATGCCAGCTCAGGGCTAAACGTGCCTTTCAGGGGCAGAGAAATCATAGCTTATGATGATATCCTGTGA 576 0.5017 MSRKRDKPYFSRHPPLYAAKRQRPLPRSVTVEEPIDKPTAKPAPPPAVVVTGLPMDCSVLDLKSRFEIYGSISRIRIDRSGVGYITYRTKESAEVAIAAALDPSFGISIDSKRVQVLWATDPLAQWREGVGNKDKGSSSKLLRAEVPLRRHGRGNKLASAIVSPKGKADDASSGLNVPFRGREIIAYDDIL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00154 191 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 121 IPR000504 GO:0003723
Pte14g00154 191 Gene3D - 25 159 IPR012677 -
Pte14g00154 191 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 99 IPR000504 GO:0003723
Pte14g00154 191 CDD RRM_SF 52 116 - -
Pte14g00154 191 SUPERFAMILY RNA-binding domain, RBD 25 128 IPR035979 GO:0003676
Pte14g00154 191 PANTHER GEO13361P1-RELATED 41 178 - -
Pte14g00154 191 MobiDBLite consensus disorder prediction 21 43 - -
Pte14g00154 191 SMART rrm1_1 47 117 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00154 Pte-Chr14 6632316 6634510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00154 1 192 Homeobox Transcription Factor Family AT1G27050 57.282 3.69e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00154 - - zju:107428806 269.626