Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00145 ATGTCCCCTACGGTTTTTTCTTCTTCAACTTCACTCCCCGTACAGTTTTGCTCTTCGTTTTCGAATCTCCACACTCATCCATCCTTGAGCCTCCGTCCTAAACTCACTTTCACCCGCTCTTCTCCGACCCTAACCTCGACACCATACAAGAACCTATCTGCCAAATGTAGCTACTCTGAGTTCTTGGAGCAGCAAAGCTTCGGCAGTGCCGAACATGCATCTCGGCCTTCAGGTGGAGGAGCATTGCCACCGAAGGTTTTTGTGGGTCATTCTATATACAAAGGGAAGGCAGCACTGACAGTGAATCCTAGCCCCCCTAAATTTGCTTGTTTGGAGTCAGGGGCATATAAAATTTCTAGGGAAGGTTATGTTCTACTTCAGTTTGCTCCTGCCGTCGGTATGAGGCAGTATGATTGGAACAGAAAGCAGGTATTCTCTCTCTCAGTAGTTGAGATGGGAAATCTCATGTGCCTTGGCACTACTGATTCATTGGAATTCTTCCATGATCCGTTTAAGGGAAAAAGTGACGAAGGGAAGGTAAGGAAGGTGTTGAGGGTGGAGCCACTTACAGATCGTTCTGGGCACATATTCAACCTCAGTGTTCAAGACAAGCTTGTGAATGTAGACGAGAGCATTTATATCCCTGTTACCAAAGCTGAGTTGGCTGTCTTGACCTCTGTTTTCAATTATATCATACCCTATCTCTTGGGTTGGCATACCTTCGGTAACAGCATAACACCAGATGATTCCAGCCGTGTGAATAATGTCAATCCAAGATACGGGGGAGACTTTGAGTGGAGTAGATAA 807 0.4597 MSPTVFSSSTSLPVQFCSSFSNLHTHPSLSLRPKLTFTRSSPTLTSTPYKNLSAKCSYSEFLEQQSFGSAEHASRPSGGGALPPKVFVGHSIYKGKAALTVNPSPPKFACLESGAYKISREGYVLLQFAPAVGMRQYDWNRKQVFSLSVVEMGNLMCLGTTDSLEFFHDPFKGKSDEGKVRKVLRVEPLTDRSGHIFNLSVQDKLVNVDESIYIPVTKAELAVLTSVFNYIIPYLLGWHTFGNSITPDDSSRVNNVNPRYGGDFEWSR* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00145 268 Pfam Whirly transcription factor 92 227 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pte14g00145 268 Gene3D Transcriptional Coactivator Pc4; Chain A 77 250 IPR009044 GO:0003677|GO:0006355
Pte14g00145 268 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 49 268 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pte14g00145 268 SUPERFAMILY ssDNA-binding transcriptional regulator domain 84 268 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00145 Pte-Chr14 6204761 6208700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00145 45 269 Whirly Transcription Factor Family AT1G14410 63.556 4.33e-108 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Pte14g00145 Whirly 1.3e-57 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00145 K26559 - pcin:129310571 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00145 14 6204761 6208700 Pte14g00145 14 6204761 6208700 RCT