Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00134 ATGGCTGACACTCACAGAAGTGCTGCTGGTGAGAGGGACATCGAACATGCTATTATAGCTCTGAAGAGAGGGTCATGCTTGCTTAAGTATGGGCGCAGAGGAAAGCCTAAGTTTTGTCCTTTTCGGGTTTCCCATGATGAGTCTCTACTTATTTGGTACTCTGGGAAAGAGGAGAAACATCTTAAGTTGAGTCAGGTTTCAAAGATTATTCCAGGACAGAGAACTACAACATTTCAACGGTATCCTAGGCCTGAAAAGGAATATCAATCATTTTCACTGATAAGCACTGACAGGTCCTTGGATTTGATATGCAAAGACAAGGAGGAAGCTGAAGTATGGTTTGTTGGTCTCAAGGCATTAATTACTCGAGCTACTTACCAGAGGCTGAAATGCAGTTCGAAGAGTGAATGTGCATGTTCGTCTAACCCAAATTCTCCAACTTTGCCATGTCATTCAAAAGAGAGCGAAGCTGCAGCTTTTGAGAATATTGTACAGACAAGATTGGGGAAGGCATTCTGTGACATTATCTCATATACTGCAGCTTCAAGAAGTCCTAGTCAGCCGCGATCAGTTGCCACTTCCTCTTTGTCATCTGCTTCTAGCTCTCTGGATACTTCAAATAATCGAAATTCTGCATCTGAAGCATTTCGAGTCAGCTTATCCAGTTGCGTTAGTTCTTCAAGCCAGGGTTCATGCCGTGAAGATTTTGATGCCATGGGTGATGTTTTTGTCTGGGGAGAAGGCATTGGAGATGGAATACTTGGTGGTGGTATGCGCAGAGTAGGGAATTCTCCTCTTTCAAATGTGAATGCACTTCTTCCAAAGGCATTGGAGTCAACAGTAGTTCTTGATGTTCAAAATATGGCTTGTGGTGACAGACATGCTGTGCTTGTGACCAGACAAGGCGAGATCTTCAGTTGGGGAGAGGAATCGGGAGGTAGGCTTGGTCATGGCGTAGACGCAGATGTTTCACAACCAAAGTCAATTGACTCTCTCAGTGGCATGAACATCGAATCAGTAGCTTGCGGAGAGTATCATACATGTGCTGTCACAATCTCTGGTGATCTTTACACTTGGGGTGATGGCACGTGCAGTTCTGCTATGCTAGGCCATGGGAGTGAAGTTAGTCATTGGATGCCAAAGAAAGTAGGTGGTCCTTTGGATGGTATACACGTGTTATATGTATCTTGTGGACCTTGGCATACAGCTGCCGTGGCATCATCTGGTCAGTTGTTCACATTTGGAGATGGATCATTTGGGGCCTTGGGGCATGGAGACCATAGTAGCACCAACATTCCACGTGAAGTCGAAGCTTTAAAAGGACTGAGAACTTCTAGGGTTGCTTGTGGTGTTTGGCACACTGCTGCAGTTGTTGAGGTACCAAATGTATTATCAATTACAGAACCATCAGTAGACCTTCCAACTGGAAAGCTATTCACCTGGGGAGATGGAGATAAAGGTCAACTTGGACATGGTGACAATGATTCTAAACTTATTCCCAAGTGTGTGGCAGCATTGAATGAAAATGTATGTCGTGTAGCTTGTGGCAACAACCTAACAGTTGCTCTGGCATCATCAGGGAAAGTTTATACGATGGGTAGCTCTACTTATGGGCAACTTGGATGCCCTTTAGCCGATGGAAATGCACCTTCCCATGTAGAAGGTAACATCATAAACAATTTTGTAGAAGATGTTGCCTGTGGTTCTTTTCATGTTGCAGTTTTGACTTCCAAAACAGAGGTTTATACTTGGGGTAAGGGTTCAAATGGACAGCTAGGCCATGGAGACAATATTCATAGAAATACTCCCACACTTGTTCAATTTTTAAAAGATAAGCAAGCTAAAAGCATTTTTTGTGGTTCAAATTTTACTGCTGCAATTTGTCTTCACAAATGGGCATCCAGTGCTGACCATTCTGTATGTTCTGGTTGCCAAAATCCGTTTGGGTTTAGAAGGAAACGTCACAATTGTTACAACTGTGGTCTAGTTTTCTGCAAAGTATGCAGCAGCAAGAAATCTCTGAGAGCTTCTTTGGCTCCAAATGATCAAAAGCCATATCGGGTCTGTCATGATTGTTATTCTAAGCTCAAGAATGCCAAGGATTCTAGCTCCTTGCTGCAAAATCCTAGTGTCAAAATTGGAATGCCAAAAAAGTCCACGGATGTGGGTGAGAGGGAAAGTAAAGTTAACAAGTTACGAGCAACATTATCAAGACTTTCATCTTTTGGCACTCCCGTTCAACTTGAAAGCAGGTTGCCCAAGGTTCAAGAATCACATGATACCCGTGTCTTTCCTTCTGGAAATGGAAAGTTACATGTGGGAGCTTTTAGCTCTCCGAAAGTGTCAAATTCATTGGTTGGACAACCACAGAAAATTCATTCTGTTTCTGTTCCTGCTACTAGAATAGCTTCTCGATCAACATCTCCCACTTCAACAAAATCAAGCCCACGTCAGTCTTCTGAATGTATATTTGATGATTCGAGGCTCAAAAATGACATGCTAAACCAGGAGATAGTAACTTTAAAGTCACAGGTTGAGGCTCTTAAGCAAAAGTCCCAACATCTTGAAGCTGAGCTTCTGAGAACAACTGAGCAATTGAAGGAGGTGACTGATATTGCCACAGATGAAGCGGAAAAATGCAAATCAGCAAAGGGGGTTATAAAGTCCCTTACTGCTCAGTTGAAGGAAATGGCACAGAGACTGCCTGAAGGACATGATGCTGGCACAGACTGTTTCTCTGGGGTGGATGCAATGGATGCCATCAACCAGTCCTCCAGCGAAGGTTGTATGGCAAACACAAGTAGTTATGAGACTGAAGCAAACAATGCGGGGAGTAGAATACTTCCTAATGGAACCAAAGGACAAAATGGGAGGACGGAATGGGTAGTGCAAGACGAAACCGGTGTATATATTACCTTGTCTTCCTTACCTGGCAGGGGCATTGAGCTTAAACGTGTCCGCTTCAGTAGGAGATATTTCACGGAAGAACAAGCAGAGAAGTGGTGGGCGGAAAATGGTGCCAAAGTTTGTGAGCGGCACAACATAGTTGCTTCATAG 3057 0.436 MADTHRSAAGERDIEHAIIALKRGSCLLKYGRRGKPKFCPFRVSHDESLLIWYSGKEEKHLKLSQVSKIIPGQRTTTFQRYPRPEKEYQSFSLISTDRSLDLICKDKEEAEVWFVGLKALITRATYQRLKCSSKSECACSSNPNSPTLPCHSKESEAAAFENIVQTRLGKAFCDIISYTAASRSPSQPRSVATSSLSSASSSLDTSNNRNSASEAFRVSLSSCVSSSSQGSCREDFDAMGDVFVWGEGIGDGILGGGMRRVGNSPLSNVNALLPKALESTVVLDVQNMACGDRHAVLVTRQGEIFSWGEESGGRLGHGVDADVSQPKSIDSLSGMNIESVACGEYHTCAVTISGDLYTWGDGTCSSAMLGHGSEVSHWMPKKVGGPLDGIHVLYVSCGPWHTAAVASSGQLFTFGDGSFGALGHGDHSSTNIPREVEALKGLRTSRVACGVWHTAAVVEVPNVLSITEPSVDLPTGKLFTWGDGDKGQLGHGDNDSKLIPKCVAALNENVCRVACGNNLTVALASSGKVYTMGSSTYGQLGCPLADGNAPSHVEGNIINNFVEDVACGSFHVAVLTSKTEVYTWGKGSNGQLGHGDNIHRNTPTLVQFLKDKQAKSIFCGSNFTAAICLHKWASSADHSVCSGCQNPFGFRRKRHNCYNCGLVFCKVCSSKKSLRASLAPNDQKPYRVCHDCYSKLKNAKDSSSLLQNPSVKIGMPKKSTDVGERESKVNKLRATLSRLSSFGTPVQLESRLPKVQESHDTRVFPSGNGKLHVGAFSSPKVSNSLVGQPQKIHSVSVPATRIASRSTSPTSTKSSPRQSSECIFDDSRLKNDMLNQEIVTLKSQVEALKQKSQHLEAELLRTTEQLKEVTDIATDEAEKCKSAKGVIKSLTAQLKEMAQRLPEGHDAGTDCFSGVDAMDAINQSSSEGCMANTSSYETEANNAGSRILPNGTKGQNGRTEWVVQDETGVYITLSSLPGRGIELKRVRFSRRYFTEEQAEKWWAENGAKVCERHNIVAS* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 476 526 IPR000408 -
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 354 408 IPR000408 -
Pte14g00134 1018 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 635 697 IPR017455 -
Pte14g00134 1018 Pfam Transcription factor BRX N-terminal domain 875 903 IPR027988 -
Pte14g00134 1018 ProSiteProfiles BRX domain profile. 959 1014 IPR013591 -
Pte14g00134 1018 Coils Coil 831 865 - -
Pte14g00134 1018 CDD PH_PLC_plant-like 12 122 - -
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 240 301 IPR000408 -
Pte14g00134 1018 SMART fyve_4 629 698 IPR000306 GO:0046872
Pte14g00134 1018 Gene3D - 823 917 - -
Pte14g00134 1018 Pfam Regulator of chromosome condensation (RCC1) repeat 353 405 IPR000408 -
Pte14g00134 1018 Pfam Regulator of chromosome condensation (RCC1) repeat 526 575 IPR000408 -
Pte14g00134 1018 Pfam Regulator of chromosome condensation (RCC1) repeat 476 523 IPR000408 -
Pte14g00134 1018 Pfam Regulator of chromosome condensation (RCC1) repeat 302 350 IPR000408 -
Pte14g00134 1018 Pfam Regulator of chromosome condensation (RCC1) repeat 408 457 IPR000408 -
Pte14g00134 1018 Pfam Regulator of chromosome condensation (RCC1) repeat 580 627 IPR000408 -
Pte14g00134 1018 CDD FYVE_like_SF 641 693 - -
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 409 460 IPR000408 -
Pte14g00134 1018 Gene3D - 365 468 IPR009091 -
Pte14g00134 1018 Gene3D - 177 364 IPR009091 -
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 527 578 IPR000408 -
Pte14g00134 1018 MobiDBLite consensus disorder prediction 707 727 - -
Pte14g00134 1018 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 447 457 IPR000408 -
Pte14g00134 1018 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 645 704 IPR013083 -
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 579 630 IPR000408 -
Pte14g00134 1018 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 288 298 IPR000408 -
Pte14g00134 1018 Gene3D - 473 644 IPR009091 -
Pte14g00134 1018 Coils Coil 880 900 - -
Pte14g00134 1018 Pfam Transcription factor regulating root and shoot growth via Pin3 959 1013 IPR013591 -
Pte14g00134 1018 MobiDBLite consensus disorder prediction 799 821 - -
Pte14g00134 1018 MobiDBLite consensus disorder prediction 184 207 - -
Pte14g00134 1018 FunFam PH, RCC1 and FYVE domains-containing protein 1 211 462 - -
Pte14g00134 1018 SUPERFAMILY RCC1/BLIP-II 239 632 IPR009091 -
Pte14g00134 1018 SUPERFAMILY PH domain-like 15 121 - -
Pte14g00134 1018 Pfam FYVE zinc finger 631 697 IPR000306 GO:0046872
Pte14g00134 1018 SUPERFAMILY FYVE/PHD zinc finger 631 706 IPR011011 -
Pte14g00134 1018 Gene3D - 13 130 IPR011993 -
Pte14g00134 1018 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 395 405 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 411 425 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 285 298 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 354 370 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 395 411 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 516 534 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 574 595 IPR000408 -
Pte14g00134 1018 PRINTS Chromosome condensation regulator RCC1 signature 304 320 IPR000408 -
Pte14g00134 1018 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 57 893 - -
Pte14g00134 1018 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 302 353 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00134 Pte-Chr14 5170298 5177551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00134 956 1015 Major Intrinsic Protein MIP AT1G31880 50.000 2.48e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00134 - - qsa:O6P43_033034 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00134 14 5170298 5177551 Pte14g00134 14 5170298 5177551 RCT