Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00110 ATGGATCTGCAAAACCAAGGCATGAATTTAGTGCTGTCTGCTGATGCTAAGCCAAGGCTGAAATGGACCCCCGAGCTTCACCAGCGATTTGTTGAGGCAGTTAACCAGGTTGGAGGACCAGAAAAAGCAACGCCAAAGAGTCTTATGAGGGTGATGGGAATTCCAGGACTGACGCTGTATCATCTGAAGAGCCATTTGCAGAAGTTCAGGCTGGGAAAAATTTGTCAACATACAGAAACTTGCTCAGACAATAATCAAGAAGACTGCAGAGATAGTCAAGGCAATGATAGCAACCGCAGTAGAGAAATCAACTGTGTAATCGATAATCAAATGAATGAAAGCTTGCAGATAGTTGAGGCCCTCCAGAAGCAAATAGAAGTGCAGAGGAAACTCCACGAGCAAATTGAGGTACAGAGGCGTCTGCAGCTGCGCATTGAAGCTCAAGGGAACTACTTGCAATCAGTGCTTAAGAAGGCTCAAGAAACATTGACTCAATACAATTCTTCCTCAGTTGGTATTGAAACAGCAAAAGCTGAATTGTCTCGATTAGTCTCAATAATCAGCAATGCTTATCCAACTTCTCCGACCTCAGAAATTACAGAAACACGGATTATGAACATTAAAGAATTGAAAAGGAAAGAAACAGATGGTACAATATGTTCATTAGGGAGCTCCATGACATCTTTAGAGAGCTCCGGGAGAAAGGAAGAGAAGCAGCCAACGATCGGGGGTGGAGATCCTCAAGTAGCCTACAGGGCACCAGTAGTAGAATTGACACTAATGGCTATCCACCCACAAGAAATGGCCCTAAATGGTAATGGACGCAGTGAAGGAAGAGAGAGAAACAGAAATGGAGTAACCAATTCTGGAGAAGGTTCCATTGAACAACCATTTGTTAAGAGATGTGGCGACAAGTCAAGGAGATTAGAATCGTCACATATGCTTGACTTGAACAGTCAATATCACAGTGACCTTCACTTAAACTGA 987 0.4326 MDLQNQGMNLVLSADAKPRLKWTPELHQRFVEAVNQVGGPEKATPKSLMRVMGIPGLTLYHLKSHLQKFRLGKICQHTETCSDNNQEDCRDSQGNDSNRSREINCVIDNQMNESLQIVEALQKQIEVQRKLHEQIEVQRRLQLRIEAQGNYLQSVLKKAQETLTQYNSSSVGIETAKAELSRLVSIISNAYPTSPTSEITETRIMNIKELKRKETDGTICSLGSSMTSLESSGRKEEKQPTIGGGDPQVAYRAPVVELTLMAIHPQEMALNGNGRSEGRERNRNGVTNSGEGSIEQPFVKRCGDKSRRLESSHMLDLNSQYHSDLHLN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00110 328 Pfam MYB-CC type transfactor, LHEQLE motif 116 162 IPR025756 -
Pte14g00110 328 Gene3D - 16 74 - -
Pte14g00110 328 Pfam Myb-like DNA-binding domain 19 68 IPR001005 -
Pte14g00110 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 274 IPR044848 GO:0003700
Pte14g00110 328 Coils Coil 118 138 - -
Pte14g00110 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Pte14g00110 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Pte14g00110 328 MobiDBLite consensus disorder prediction 224 248 - -
Pte14g00110 328 FunFam Myb family transcription factor 16 74 - -
Pte14g00110 328 MobiDBLite consensus disorder prediction 269 305 - -
Pte14g00110 328 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00110 Pte-Chr14 4505322 4507472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00110 8 301 G2-like Transcription Factor Family AT1G69580 45.860 8.84e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte14g00110 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00110 - - qsa:O6P43_033005 393.66