Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00089 ATGGAGATGGAGCGCGTGACTGAATTTCCTCATACTCATCTGGATCGGCGACCAAGAAAGAGGGCGCGTTTGGGTTGGGACATCCCTGAGGCTCCAAAGGCTCAGGTAGGAATGTTTTGTGCACAAGATGTTGGAAATATGCCAAGCTTTGCACCTCCATCAGCACCCTCAGAACATACTAATTCCCTATTTGTAAAGGGAGTCGCTCGAAATGGTTCGCCCCCATGGCGTGACGATGACAAAGATGGCCATTACACATTTGAGCTTGGAGATAATTTAACTTCTCGCTTCAAAATTCACAGTAAGATGGGCGAAGGTACATTTGGTCAGGTTTTGGAGTGCTGGGACAGAGAACGAAAGGAAATGGTTGCTGTTAAGATTGTCCGCAGTATAAAGAAGTACCGTGAAGCTGCAATGATTGAAATAGAGGTTTTTGAGAAGCTTGGACCAAGTTTATATGATTTCCTTCAGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGTCAACTGTTGGAATGTGTAGCATTTATGCATGATTTGCGAATGATACATACAGACTTGAAACCTGAAAATATTCTATTGGTATCGGCCGACTACCTTAAAGTCCCTGACTACAAGAGTTCCTCCCGCTCTCCAAGCTCGTATTTTAAGAGAGTGCCAAAGTCAAGTGCTATTAAGGTAATTGATTTTGGAAGCACCACTTATGAAAGACAAGATCAAAATTACATAGTTTCAACACGTCATTATCGGGCCCCTGAAGTCATTCTTGGTCTTGGTTGGAGTTATCCATGTGATGTATGGAGTGTTGGTTGCATATTGGTGGAACTGTGCACGGGCGAGGCATTGTTCCAGACTCACGAGAATTTGGAACATCTTGCTATGATGGAGAGAGTACTTGGCCCGGTACCTCATCATTTGTTGAAGAGAGTAGATCGGCACGCAGAAAAGTATGTTAGAAGGGGAAGACTTGACTGGCCTGAAGGTGCAACATCAAGGGAGAGCATTAAAGCTGTAACGAAGCTTCCACGGCTGCAGAACCTAATTATGCAACACGTCGATCACTCTGCTGGAGATCTCATCCAGCTTCTGCAGGGGTTACTCAGATATGACCCTTCAGAGAGGTTGACAGCGAGGGAAGCATTAAGACATTCCTTTTTCGCGCGAGACCAACTTAGGAGGTGA 1200 0.4483 MEMERVTEFPHTHLDRRPRKRARLGWDIPEAPKAQVGMFCAQDVGNMPSFAPPSAPSEHTNSLFVKGVARNGSPPWRDDDKDGHYTFELGDNLTSRFKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRSIKKYREAAMIEIEVFEKLGPSLYDFLQKNNYRSFPIDLVREIGSQLLECVAFMHDLRMIHTDLKPENILLVSADYLKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPVPHHLLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVTKLPRLQNLIMQHVDHSAGDLIQLLQGLLRYDPSERLTAREALRHSFFARDQLRR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00089 399 MobiDBLite consensus disorder prediction 1 20 - -
Pte14g00089 399 SUPERFAMILY Protein kinase-like (PK-like) 84 394 IPR011009 -
Pte14g00089 399 Gene3D Transferase(Phosphotransferase) domain 1 148 392 - -
Pte14g00089 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pte14g00089 399 Gene3D Phosphorylase Kinase; domain 1 71 147 - -
Pte14g00089 399 SMART serkin_6 97 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte14g00089 399 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 144 395 - -
Pte14g00089 399 CDD PKc_CLK 84 392 - -
Pte14g00089 399 FunFam Serine/threonine-protein kinase AFC2 143 392 - -
Pte14g00089 399 ProSiteProfiles Protein kinase domain profile. 97 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte14g00089 399 Pfam Protein kinase domain 151 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00089 Pte-Chr14 3942147 3945311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00089 97 392 Core Cell Cycle Gene Families AT1G76540 23.512 1.11e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pte14g00089 Pkinase 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00089 K08287 - gmx:100804452 725.702