Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00084 ATGCATTCTACAACCATGCTGCAAGCAAGTATTCCCACCGTCGACTTCTTAAAAAACACAGAAACATTTGTCGATTGCACGAGCATTACCGAACATGCGGAGCCTGATATCTTCGTCCAAACCTCCGGTGGCCTGCGTATCCCTGCGCACACTGGAATTCTGGCTTCAGCATCACCTGTTTTGGAGAACGTCATCGATCAACGGTCAAAGAAATATAGCAGCAATTCTGACAAAGTCATTCAAATCCTCGGTGTTCCTTGCCATGCCGTCACCGCTTTCGTAGGATTCCTCTACTACTCCAGGTGCACTGAAGAACAGATAGATCAGTATGGTATGCATCTGCTAGCACTGTCCCATGTGTATTTGGTACCCCAGCTGAAACAGAGGTGCATCAGGGGATTGATCAAACGCTTATCTATTGAGAACTTGGTGGATGTTCTTCAACTTGCCAGACTATGCGATGCACCTGATCTTTATCTCAAGTGCATGAAACTGCTCACTCATCACTTCAAGGCTGTTGAGACAACCGAAGGTTGGAAATTCTTGGAGAAACACGATCCTTGGCTTGAGCTTGAGATTCTACAGTTCATGGATGAAGCTGAAACGAGGAAGAAGAGGACAAAGAAGCACAAAGAGGAGATGAAGCTGTACATGCAGCTGAGTGAGGCTATGAATTGTTTGGAGCACATATTCACAGAAGGATGCACTGACGTGAGGCCTTGCCACGTGGAGAGGAACAAGAAGAGAGAACCTTGTGACAAGTATTCCACGTGTCAAGGTCTGCAGTTTTTGATTCGTCACTTTGCTATGTGTAAGAAAAGGGTTAACGGCGGGTGCTTGCGCTGTAAGCGTATGTGGCAATTACTCCGATTGCACTCTGCCATTTGTGAACTTACTGACTCGTGTACAGTTCCTCTCTGCAGGAACTTTAAACTGAAACAACAGCAAGAGACGAGAAATGACGATATGAGGTGGAAATTACTGGCTAGGAAGGTGGTGTCCGCCAAAGCCATGTGCTCTTTATCTTTACCAAAGATGAAGAAACGAGAGGAACGAGTCCATTTATAA 1068 0.4579 MHSTTMLQASIPTVDFLKNTETFVDCTSITEHAEPDIFVQTSGGLRIPAHTGILASASPVLENVIDQRSKKYSSNSDKVIQILGVPCHAVTAFVGFLYYSRCTEEQIDQYGMHLLALSHVYLVPQLKQRCIRGLIKRLSIENLVDVLQLARLCDAPDLYLKCMKLLTHHFKAVETTEGWKFLEKHDPWLELEILQFMDEAETRKKRTKKHKEEMKLYMQLSEAMNCLEHIFTEGCTDVRPCHVERNKKREPCDKYSTCQGLQFLIRHFAMCKKRVNGGCLRCKRMWQLLRLHSAICELTDSCTVPLCRNFKLKQQQETRNDDMRWKLLARKVVSAKAMCSLSLPKMKKREERVHL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00084 355 SMART BTB_4 35 138 IPR000210 GO:0005515
Pte14g00084 355 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 18 351 IPR044513 -
Pte14g00084 355 Gene3D - 139 207 - -
Pte14g00084 355 SUPERFAMILY POZ domain 36 168 IPR011333 -
Pte14g00084 355 CDD BACK 139 186 - -
Pte14g00084 355 Gene3D TAZ domain 208 341 IPR035898 -
Pte14g00084 355 Pfam TAZ zinc finger 221 307 IPR000197 -
Pte14g00084 355 FunFam BTB/POZ and TAZ domain-containing protein 2 210 336 - -
Pte14g00084 355 SMART TAZ_2 214 308 IPR000197 -
Pte14g00084 355 FunFam BTB/POZ and TAZ domain-containing protein 2 139 209 - -
Pte14g00084 355 Gene3D Potassium Channel Kv1.1; Chain A 2 138 IPR011333 -
Pte14g00084 355 ProSiteProfiles BTB domain profile. 35 106 IPR000210 GO:0005515
Pte14g00084 355 Pfam BTB/POZ domain 34 136 IPR000210 GO:0005515
Pte14g00084 355 SUPERFAMILY TAZ domain 213 312 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00084 Pte-Chr14 3915608 3918608 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pte14g00084 BTB 1.5e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00084 - - qsa:O6P43_030791 484.567