Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00072 ATGGGGAAAAGGAAAAGAGCGCAAGAGGAGAGCAGCAGCTCTGATGGTAACGTGGATTTGCAGCAGCTGATGGTCGTTGCAGCTGAAGCCCTAGGGAGAGCAACAACTAGAAGGAAGAAGTACATTGGGGTTCGCCAAAGGCCGTCAGGTAGATGGGTGGCTGAGATAAAGGATACAATACACAACATAAGAGTGTGGCTTGGCACGTATGACACTGCTGAAGATGCTGCAAGGGCCTATGATGAAGCAGCATGCATGCTTCGTGGAACCAATACTCGCACCAATTTCTCACGCCGCGATTATCCGAATCCAAATCCAGCCCTACCTTCAAAAATTTCCAATCTTCTACTTCTGAGACTTAAAGCCAGGATAGAGGCCTCTAACTTTGTTGCTCCTTCGTCTTCTTTCAACGTTGATCTTCATGAGAAAGAAATGGTAGAAGACCCCTCGTTTGATACTAGTAGTTATCTGAACCTGTACCTGCATGAAGATGGTGTCGTTCATGAGAATCATGATGCTGCTAGTAGTAATAGTCCTGGTGAAATGAATGTGAGTGGTAGGACGGAATTAAGTTCTACTGTTCACTTAAGGACTGATCATCAAGGTGTGGACCATAATTCGTCCGCTGCTGTTGATGGTAGCAATCAAGAGGGTTACAGAAAATCTGAGGAGAAAGAAGAATTGGAAGAATGTGACATGGGAATCATAGACTTCGAATCTCTTGATTCCATTGTATCAAATTTTGAATTTTCACCGTTTGAGATAGTGCAGGAAATGGTAGCAGTAGAGGAGGATAATTATGGGGAGAAGACATCAACAGTTAACGAAACTGTTAAGATGATGAAGTTTGAGCGCAAATTCTCTGCTTCACTATATGCCTTCAATGGGGTTTCGGAGTGTCTGAGGCTTGAAGATGGGTCAGCGGACACTAGTGGACTCGAAAGCTATGAAGCAGGACAAATGGTCACCTCCAATAGTATAAATAGCCATATGAATGATGAAGGGGTTAAGAGAAATGAGGAGGATAACTATTTTGAACAAATGCTTCAAGAACAAATTCAGTGCATGTCGAATTTGGTAGAGTCCTCTTCATCAATGTCATCATCATAG 1110 0.4324 MGKRKRAQEESSSSDGNVDLQQLMVVAAEALGRATTRRKKYIGVRQRPSGRWVAEIKDTIHNIRVWLGTYDTAEDAARAYDEAACMLRGTNTRTNFSRRDYPNPNPALPSKISNLLLLRLKARIEASNFVAPSSSFNVDLHEKEMVEDPSFDTSSYLNLYLHEDGVVHENHDAASSNSPGEMNVSGRTELSSTVHLRTDHQGVDHNSSAAVDGSNQEGYRKSEEKEELEECDMGIIDFESLDSIVSNFEFSPFEIVQEMVAVEEDNYGEKTSTVNETVKMMKFERKFSASLYAFNGVSECLRLEDGSADTSGLESYEAGQMVTSNSINSHMNDEGVKRNEEDNYFEQMLQEQIQCMSNLVESSSSMSSS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00072 369 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Pte14g00072 369 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Pte14g00072 369 MobiDBLite consensus disorder prediction 200 221 - -
Pte14g00072 369 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Pte14g00072 369 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 215 - -
Pte14g00072 369 MobiDBLite consensus disorder prediction 200 215 - -
Pte14g00072 369 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Pte14g00072 369 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Pte14g00072 369 FunFam ethylene-responsive transcription factor RAP2-11 39 98 - -
Pte14g00072 369 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Pte14g00072 369 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Pte14g00072 369 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00072 Pte-Chr14 3329817 3330926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00072 38 116 AP2-EREBP Transcription Factor Family AT5G19790 68.354 3.39e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte14g00072 AP2 2.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00072 K09286 - jre:109003219 239.965