Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte14g00066 | ATGTCGGAGTCCGAGGAGCATCACTTTGAATCCAAGGCCGACGCCGGTGCTTCCAAGACCTTTCCCCAACAGGCTGGCACCATCCGTAAGAACGGATACATTGTTATCAAGGGGAGACCATGCAAGGTTGTTGAGGTTTCTACTTCAAAAACTGGAAAGCATGGTCATGCTAAGTGCCATTTTGTTGCTATTGACATCTTTACTGCAAAGAAGCTTGAAGATATTGTGCCTTCTTCCCACAACTGTGATGTTCCTGAGGTTACCCGTACTGACTATCAGTTGATTGATATCTCAGAGGATGGATTTGTGAGCTTGCTGACTGATAATGGCAGCACTAAGGATGACCTTAGGCTTCCAACTGATGAAAATTTGCTTACGCAGATCAAGGATGGATTTGCTGAGGGTAAGGATCTTGTCGTTTCTGTCATGTCTGCCATGGGAGAGGAGCAGATCTGTGCATTGAAGGACATTGGTCCCAAGAACTGA | 486 | 0.4609 | MSESEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDENLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN* | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte14g00066 | 161 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 87 | 155 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Pte14g00066 | 161 | SUPERFAMILY | Translation proteins SH3-like domain | 16 | 94 | IPR008991 | - | |
Pte14g00066 | 161 | SMART | eIF_5a_2 | 86 | 155 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Pte14g00066 | 161 | FunFam | Eukaryotic translation initiation factor 5A | 1 | 86 | - | - | |
Pte14g00066 | 161 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Pte14g00066 | 161 | FunFam | Eukaryotic translation initiation factor 5A | 87 | 159 | - | - | |
Pte14g00066 | 161 | PIRSF | Transl_init_eIF5A | 1 | 158 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Pte14g00066 | 161 | Gene3D | - | 87 | 160 | IPR012340 | - | |
Pte14g00066 | 161 | CDD | S1_eIF5A | 87 | 157 | - | - | |
Pte14g00066 | 161 | SUPERFAMILY | Nucleic acid-binding proteins | 87 | 157 | IPR012340 | - | |
Pte14g00066 | 161 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 1 | 158 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Pte14g00066 | 161 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 51 | 58 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Pte14g00066 | 161 | NCBIfam | translation initiation factor IF-5A | 19 | 154 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Pte14g00066 | 161 | Gene3D | - | 1 | 86 | IPR014722 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte14g00066 | Pte-Chr14 | 3122414 | 3123964 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte14g00066 | 5 | 160 | Eukaryotic Initiation Factors Gene Family | AT1G13950 | 89.103 | 2.99e-101 | 286 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte14g00066 | K03263 | K02180 | csv:101211156 | 313.538 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte14g00066 | 14 | 3122414 | 3123964 | Pte14g00066 | 14 | 3122414 | 3123964 | RCT |