Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00057 ATGTTTGGGTTTAAGAAAAGTGATGGAAATAATGATAAACCAGAAAACGAGAAGTACGAGAATGATTTCCAGGAATCTGGAGGGCTGCAGAACCAGAGTGTGGAGGAACTAGAGAACTATGCGGCTTACAAGTCTGAGGAGACAACGAATGATCTCAACAACTGCCTACGGATTGCAGAGGACATTAGAGGAGAGGCCACAAGAACCCTTGACACATTGCACCAGCAGGGAGATCAGATTGAAAGGACTCATTACATGGTTGCTGACACAGACAAGGATTTGAGCAAGGGAGAAAAGCTTCTAAACAATCTTGGTGGAATGTTTTCAAAGCCTTGGAAACCAAAGAAGACAAGGGAGATTAATGGCCCTGTGGTTACTGCAGATAAGCCATCTAAGAAAGGCGAAAAGAATCAGCAAGAGAGGGAGAAGCTGGGGTTAGGTAAAGGAAAGGGGAAGTCCCCTTCTCAACCTCCACCTTCTGAACCAGCGGGGGCAATGCAGAAAGTTGAGGCTGAGAGAGCAAAACAAGATGGTGCACTTGATGATCTGAGTGGCATATTAGGTGACTTGAAGGGTATGGCTTCGGACATGGGATCTGAACTTGATAGGCATAATAAAGCTATGGATTATCTTGGTGATGATGTGGATGAAGTGAACAGCCGAGTTAAAGGTGCCAACCAACGTGCACGCAAATTACTCAAGTAA 705 0.4511 MFGFKKSDGNNDKPENEKYENDFQESGGLQNQSVEELENYAAYKSEETTNDLNNCLRIAEDIRGEATRTLDTLHQQGDQIERTHYMVADTDKDLSKGEKLLNNLGGMFSKPWKPKKTREINGPVVTADKPSKKGEKNQQEREKLGLGKGKGKSPSQPPPSEPAGAMQKVEAERAKQDGALDDLSGILGDLKGMASDMGSELDRHNKAMDYLGDDVDEVNSRVKGANQRARKLLK* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00057 234 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Pte14g00057 234 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 10 233 - -
Pte14g00057 234 FunFam SNAP25 homologous protein SNAP33 167 234 - -
Pte14g00057 234 FunFam SNAP25 homologous protein SNAP33 28 105 - -
Pte14g00057 234 MobiDBLite consensus disorder prediction 129 148 - -
Pte14g00057 234 MobiDBLite consensus disorder prediction 23 50 - -
Pte14g00057 234 SUPERFAMILY SNARE fusion complex 32 103 - -
Pte14g00057 234 CDD SNARE_Qc 173 231 - -
Pte14g00057 234 CDD SNARE_SNAP25N_23N_29N_SEC9N 39 103 IPR044766 GO:0005484|GO:0031201
Pte14g00057 234 Gene3D - 28 106 - -
Pte14g00057 234 Pfam Snare region anchored in the vesicle membrane C-terminus 48 102 - -
Pte14g00057 234 SMART tSNARE_6 37 104 IPR000727 -
Pte14g00057 234 SMART tSNARE_6 165 232 IPR000727 -
Pte14g00057 234 MobiDBLite consensus disorder prediction 1 50 - -
Pte14g00057 234 Gene3D - 167 233 - -
Pte14g00057 234 MobiDBLite consensus disorder prediction 8 22 - -
Pte14g00057 234 SUPERFAMILY SNARE fusion complex 164 233 - -
Pte14g00057 234 MobiDBLite consensus disorder prediction 106 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00057 Pte-Chr14 2884605 2885984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00057 167 230 SNARE and Associated Proteins AT3G09740 42.188 8.72e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00057 K18211 - qsa:O6P43_032930 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00057 14 2884605 2885984 Pte14g00057 14 2884605 2885984 RCT