Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00054 ATGGATGAAGACAGAGACAGAAATCACATGGCAGCATCTGATCCATCTACAGCCACCGCAAGAACCACCACGCCTGAATTCGCTGCCGGCCCGTCCACTTGTTGGACTCTTGATGATTCTGTGGATGTTTATATTTCCTCAGGTATTGAGAGAGAAAACTCCGTACTCAGTGAGTACGGATGGAATAGTCTTGAACCCGACCTTCACGATGGGATCGATAATCACGATAGATCTTATTTGACCAGTGGAAGTAGTAGTAGCCTGTTGCTCCAGCGGGGGGAGAACTGGAATTATGCGCGTTTCACGGCAGCTTCTGGTTTCTCTGAACAGGTATCCGATCAGGTCACCACGTTAAACAACAATCAGTCTGTTTCTTCGAGCTCGAATGATGATCCACTGGAAAAATCTACTGGTTCAGATGAAAAACCTGCTGATATACAGAGCAAGGTTAAAAAGAAAGTACAAAGGAGAATTCGCCAGCCACGTTTTGCATTTATGACCAAGAGTGATATTGATCATCTTGAAGATGGATACAGATGGAGAAAATATGGTCAGAAGGCTGTTAAAAATAGCCCTTTTCCAAGGAGTTACTACCGTTGCACGAACAGCAAATGCACAGTGAAGAAAAGAGTGGAGCGATCTTCTGAAGACCCTTCTATTGTGATCACAACATATGAAGGACAACACTGCCATCACACCATAGGGTTTTCTCGAGGTGGAGTCGTCAATCATAATGTTGCTTTTATGGGCCAAATGCCTCCTCAGATGCCACAACCTTATTATCCAAATGAATTACCCAGAGAAAGTTTACTCGGAACCACGACATCATACCAACAGGTTGAGGATGCAGCTCAAGGTTTTCGATCAATGCCAGATTCAACTGCACAACCTCCGACAGATGAAGGTCTACTTGGAGACATGGTGCCCCATCCAATCCATAATAGATGA 948 0.4462 MDEDRDRNHMAASDPSTATARTTTPEFAAGPSTCWTLDDSVDVYISSGIERENSVLSEYGWNSLEPDLHDGIDNHDRSYLTSGSSSSLLLQRGENWNYARFTAASGFSEQVSDQVTTLNNNQSVSSSSNDDPLEKSTGSDEKPADIQSKVKKKVQRRIRQPRFAFMTKSDIDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPSIVITTYEGQHCHHTIGFSRGGVVNHNVAFMGQMPPQMPQPYYPNELPRESLLGTTTSYQQVEDAAQGFRSMPDSTAQPPTDEGLLGDMVPHPIHNR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00054 315 SMART WRKY_cls 174 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte14g00054 315 MobiDBLite consensus disorder prediction 119 154 - -
Pte14g00054 315 MobiDBLite consensus disorder prediction 134 151 - -
Pte14g00054 315 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 109 239 IPR044810 GO:0003700
Pte14g00054 315 SUPERFAMILY WRKY DNA-binding domain 166 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte14g00054 315 MobiDBLite consensus disorder prediction 287 315 - -
Pte14g00054 315 Pfam WRKY DNA -binding domain 175 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte14g00054 315 MobiDBLite consensus disorder prediction 119 133 - -
Pte14g00054 315 ProSiteProfiles WRKY domain profile. 169 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte14g00054 315 MobiDBLite consensus disorder prediction 1 28 - -
Pte14g00054 315 FunFam WRKY transcription factor 57 160 234 - -
Pte14g00054 315 MobiDBLite consensus disorder prediction 12 28 - -
Pte14g00054 315 Gene3D WRKY domain 161 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00054 Pte-Chr14 2753482 2759740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00054 119 314 WRKY Transcription Factor Family AT1G69310 57.353 6.65e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte14g00054 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00054 - - gmx:100170676 289.271