Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00026 ATGGCAGCTCAAGGTGTACAGAAGAACACGTTGTATGTCGGTGGGTTAGCAGAGGAGGTCAACGAGGCTATCCTTCACGCTGCCTTCATACCCTTTGGTGACATCAAAGACGTGAAAACCCCATTGGATCAAGCCACTCAGAAACACCGCTCTTTCGGGTTCGTCACTTTTTTAGAGAGAGAAGATGCCGCTGCTGCCATGGATAACATGGATGGTGCTGAGCTTTACGGACGTGTACTCACTGTCAATTACGCTTTGCCGGAAAAAATCAAGGGTGGTGAACAGGGCTGGGCTGCACAGCCAATTTGGGCGGATGCCGACACTTGGTTTGAGCGACAACAGCAGGAAGAGGAAATGCGTCGATTAGAGGCGGAGAATCGAGCTGCCATGCAGGCTGCTGAAGATTTACATAGGAAGAAGTTGACCGAAGAGAGAGAAGGGGAAAAAGAGGAAATTGACCTTAAGGATGACCCTATGGCAAGGGCTGAAGCAGAGTCCATGAAAGATTAA 510 0.4961 MAAQGVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMRRLEAENRAAMQAAEDLHRKKLTEEREGEKEEIDLKDDPMARAEAESMKD* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00026 169 FunFam Peptidyl-prolyl cis-trans isomerase 1 154 - -
Pte14g00026 169 SUPERFAMILY RNA-binding domain, RBD 6 96 IPR035979 GO:0003676
Pte14g00026 169 CDD RRM_PPIE 11 85 IPR034168 GO:0003723
Pte14g00026 169 SMART rrm1_1 10 83 IPR000504 GO:0003723
Pte14g00026 169 Coils Coil 112 139 - -
Pte14g00026 169 PANTHER ATPASE E1 4 168 - -
Pte14g00026 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 80 IPR000504 GO:0003723
Pte14g00026 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 9 87 IPR000504 GO:0003723
Pte14g00026 169 MobiDBLite consensus disorder prediction 127 169 - -
Pte14g00026 169 Gene3D - 2 150 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00026 Pte-Chr14 1910599 1912527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00026 9 87 Eukaryotic Initiation Factors Gene Family AT3G11400 37.975 2.22e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00026 - - pper:18789388 281.567