Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte14g00026 | ATGGCAGCTCAAGGTGTACAGAAGAACACGTTGTATGTCGGTGGGTTAGCAGAGGAGGTCAACGAGGCTATCCTTCACGCTGCCTTCATACCCTTTGGTGACATCAAAGACGTGAAAACCCCATTGGATCAAGCCACTCAGAAACACCGCTCTTTCGGGTTCGTCACTTTTTTAGAGAGAGAAGATGCCGCTGCTGCCATGGATAACATGGATGGTGCTGAGCTTTACGGACGTGTACTCACTGTCAATTACGCTTTGCCGGAAAAAATCAAGGGTGGTGAACAGGGCTGGGCTGCACAGCCAATTTGGGCGGATGCCGACACTTGGTTTGAGCGACAACAGCAGGAAGAGGAAATGCGTCGATTAGAGGCGGAGAATCGAGCTGCCATGCAGGCTGCTGAAGATTTACATAGGAAGAAGTTGACCGAAGAGAGAGAAGGGGAAAAAGAGGAAATTGACCTTAAGGATGACCCTATGGCAAGGGCTGAAGCAGAGTCCATGAAAGATTAA | 510 | 0.4961 | MAAQGVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMRRLEAENRAAMQAAEDLHRKKLTEEREGEKEEIDLKDDPMARAEAESMKD* | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte14g00026 | 169 | FunFam | Peptidyl-prolyl cis-trans isomerase | 1 | 154 | - | - | |
Pte14g00026 | 169 | SUPERFAMILY | RNA-binding domain, RBD | 6 | 96 | IPR035979 | GO:0003676 | |
Pte14g00026 | 169 | CDD | RRM_PPIE | 11 | 85 | IPR034168 | GO:0003723 | |
Pte14g00026 | 169 | SMART | rrm1_1 | 10 | 83 | IPR000504 | GO:0003723 | |
Pte14g00026 | 169 | Coils | Coil | 112 | 139 | - | - | |
Pte14g00026 | 169 | PANTHER | ATPASE E1 | 4 | 168 | - | - | |
Pte14g00026 | 169 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 11 | 80 | IPR000504 | GO:0003723 | |
Pte14g00026 | 169 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 9 | 87 | IPR000504 | GO:0003723 | |
Pte14g00026 | 169 | MobiDBLite | consensus disorder prediction | 127 | 169 | - | - | |
Pte14g00026 | 169 | Gene3D | - | 2 | 150 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte14g00026 | Pte-Chr14 | 1910599 | 1912527 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte14g00026 | 9 | 87 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 37.975 | 2.22e-11 | 58.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte14g00026 | - | - | pper:18789388 | 281.567 |