Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00017 ATGAGAATTATTGCAGCACAAGACGAACTTGTTCAATTAAATAAGTTTACATATCATTGCAGACACAAACAAGGGCAAGCCATGAATACTTTTGCTACAAAGAGAGTTTGCAATTCAAATGGTGACCAAGAGAGTGAGATAAGAAGAGGACCTTGGACTCTGGAAGAAGACAGCCAGCTTATTCATTACATTGCTCGTCATGGTGAAGGCCACTGGAATATGTTGGCTAAGCTTGCAGGATTGAAGAGGACCGGGAAGAGCTGCAGATTGAGGTGGCTGAATTATTTGAAACCTGATATTAAACGCGGGAATCTCACACCGAAAGAACAGCTCTTGATCCTTGAGCTCCATTCCAAGTTTGGCAATAGGTGGTCAAAAATTGCTCAACATCTTCCGGGAAGAACAGATAACGAGATTAAGAACTATTGGAGAACAAGGGTGCAGAAACAGGCACGCCAACTTAACATTGATTCAGGAAGCAAGACATTCCTTGATGCAGTCAGGTGCTTTTGGATGCCTAGGTTGCTTCAAAAGATGGAAGAAAATTCATCTGCTAGTTCAAGTCCTTCACTAACCTCGAATTCTGCTGGGGGTCCATCAGATTTTTCAATGCTGACAAGTTCAATGGCTCCACCAGTGGTGCCTCCGCCTGTTGCGACAGTGGACATGCATCACAATGAGAATAAAAACACGGATGCATACAATTTAAGTATTTGGCAGCAGCTGCCTGAAATTTCAGAATGGCCAAGAATCGCTTCGGCTTCTCATGCCATTGACATTAGCAATACCGATGTCTCCAACAACTTAATCAATACTAGTTATTTTGTGGACAGCGATAATTACTATGACATGGTTGAACTAAATTCCAGCCCCATGTCAAATTTAGAAAATAATAACATGTCACAGTTTGGATGTCATGTTGAAGAGAGTGACTGGGTGTTAGACAACATGGCTGATGCTTTATGGAACATGGATGCAATGTAA 984 0.4187 MRIIAAQDELVQLNKFTYHCRHKQGQAMNTFATKRVCNSNGDQESEIRRGPWTLEEDSQLIHYIARHGEGHWNMLAKLAGLKRTGKSCRLRWLNYLKPDIKRGNLTPKEQLLILELHSKFGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIDSGSKTFLDAVRCFWMPRLLQKMEENSSASSSPSLTSNSAGGPSDFSMLTSSMAPPVVPPPVATVDMHHNENKNTDAYNLSIWQQLPEISEWPRIASASHAIDISNTDVSNNLINTSYFVDSDNYYDMVELNSSPMSNLENNNMSQFGCHVEESDWVLDNMADALWNMDAM* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00017 327 MobiDBLite consensus disorder prediction 181 209 - -
Pte14g00017 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 96 IPR017930 -
Pte14g00017 327 FunFam MYB transcription factor 105 147 - -
Pte14g00017 327 FunFam Myb transcription factor 49 101 - -
Pte14g00017 327 Gene3D - 49 101 - -
Pte14g00017 327 SUPERFAMILY Homeodomain-like 47 143 IPR009057 -
Pte14g00017 327 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Pte14g00017 327 SMART sant 48 98 IPR001005 -
Pte14g00017 327 SMART sant 101 149 IPR001005 -
Pte14g00017 327 CDD SANT 51 96 IPR001005 -
Pte14g00017 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
Pte14g00017 327 MobiDBLite consensus disorder prediction 181 207 - -
Pte14g00017 327 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Pte14g00017 327 Pfam Myb-like DNA-binding domain 102 145 IPR001005 -
Pte14g00017 327 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 64 73 IPR001345 GO:0003824
Pte14g00017 327 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 43 224 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte14g00017 327 CDD SANT 106 145 IPR001005 -
Pte14g00017 327 Gene3D - 105 150 - -
Pte14g00017 327 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00017 Pte-Chr14 1576291 1577479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00017 44 188 MYB Transcription Factor Family AT1G68320 77.931 7.70e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g00017 Myb_DNA-binding 6.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00017 K09422 - cave:132184900 338.191