Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02185 ATGGGTGGCTTGGACTTGTGTGACGGTAGATATGACACTCCCGAGCATCGGCTTTTCGGTGATATGGACACTGTCTTCAGAGATGATTTTCATAATCCCACTTTTCCTTCCAATAGCAGCCCCCCTAGACAACCATGGCATGACTTGCACTGCAAAATTGAAGGTCCAGCTGCCTACGATATTTTGACAAATTTTGAACAAAGATGGAGGAAAGCCAGAAAATGGCGTGAATTCAAGCTGAAGAAAGTCACAAACTGGCATGATGATCCGTTGTTAAAGCTGGAACGTATCTCATGGATAATTTATCCATCTGCTACAGACAGAGACAAATGCACACGTGTGGTTCAAGAAGATGATCCAGAGAACTGGAATGTGCAGGTGTTCCGGTCAATAGATTCAGGATCTGTGAAAGGATTTCCTAAAGATTTTGAAGAAGCGAAAGCACAGAATCTTCATTGTGGCAAAAACTTGAAAGTGGACAAAAGCATCCATACTGCTTATGTGCATGCCATAAGAACAGCGCAGCACTTTATATATATAGAGAATCAATATTTTCTTGGATCTTCGTATCATTGGCCATCATACAAAAGTGCAGGTGCAGACAACTTGGTTCCAATGGAGTTGGCTTTAAAGATTGCCAGCAAGATATATGCAAATGAACGCTTTTCTGCGTATATAGTCATACCAATGTGGCCAGAGGGAGTGCCAACCAGTGCTCCCGTGCAGGAAATCTTATACTGGCAGGGACAGACGATGGCTATGATGTACAAAATTGTAGCAGATGCCCTCCAACAATCGGGCCTTTCAGATGCATATCACCCACAAGATTATTTGAATTTTTACTGCCTTGGCAAGCGCGAAATTTCATCTGGAGTAGGACACAGATTCAATGAGTCTTCTGAGAACCCGGTACAGAAGTTTCGACGTTTCATGATTTACGTACATGCCAAAGGAATGGTTGTGGATGACGAATATGTGATGGTGGGATCTGCCAACATTAACCAGAGATCCTTGGACGGTTCAAGAGACACAGAAATTGCAATGGGAGCTTACCAACCTAAATATACATGGGGAAGAAAGAACGCACACCCTCATGGCCAGGTGTATGGATACAGGATGTCACTGTGGACAGAACACCTAGGTGGAGTCCGTGATTATTTTAAAGAGCCCCAGAGCCTTGAATGCGTGAGATGTGTCAACGACATTGCCCAGAATAATTGGGAAGCATATGTGTCTGATGAGGAAAAGCAGATGACTGGAACCTTATTGCCATATCCAGTGCAAATAAGCAGTGATGGAAAAATCAATCCATTGCCAATGTTTGAGACATTCCCAGATGTTGGTGGCAAAATTCTTGGATCACCAACCTCTCTTCCCGATGCCCTAACCACATGA 1395 0.4358 MGGLDLCDGRYDTPEHRLFGDMDTVFRDDFHNPTFPSNSSPPRQPWHDLHCKIEGPAAYDILTNFEQRWRKARKWREFKLKKVTNWHDDPLLKLERISWIIYPSATDRDKCTRVVQEDDPENWNVQVFRSIDSGSVKGFPKDFEEAKAQNLHCGKNLKVDKSIHTAYVHAIRTAQHFIYIENQYFLGSSYHWPSYKSAGADNLVPMELALKIASKIYANERFSAYIVIPMWPEGVPTSAPVQEILYWQGQTMAMMYKIVADALQQSGLSDAYHPQDYLNFYCLGKREISSGVGHRFNESSENPVQKFRRFMIYVHAKGMVVDDEYVMVGSANINQRSLDGSRDTEIAMGAYQPKYTWGRKNAHPHGQVYGYRMSLWTEHLGGVRDYFKEPQSLECVRCVNDIAQNNWEAYVSDEEKQMTGTLLPYPVQISSDGKINPLPMFETFPDVGGKILGSPTSLPDALTT* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02185 464 SMART pld_4 310 337 IPR001736 GO:0003824
Pte13g02185 464 PANTHER PHOSPHOLIPASE D 1 453 IPR015679 -
Pte13g02185 464 Pfam Phospholipase D C terminal 385 454 IPR024632 -
Pte13g02185 464 SUPERFAMILY Phospholipase D/nuclease 1 79 - -
Pte13g02185 464 Gene3D Endonuclease Chain A 1 93 - -
Pte13g02185 464 Pfam PLD-like domain 302 346 IPR025202 -
Pte13g02185 464 SUPERFAMILY Phospholipase D/nuclease 151 395 - -
Pte13g02185 464 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 310 337 IPR001736 GO:0003824
Pte13g02185 464 Gene3D Endonuclease Chain A 126 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02185 Pte-Chr13 34553640 34556284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02185 1 465 Phospholipase D Gene Family (Wang group) AT2G42010 56.942 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02185 K01115 - qsa:O6P43_012204 761.14