Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02173 ATGAGCTCATTGGCATATTCAGCTGGAACTTGCTCTCAGAGAGGCATATCTTCTCTCGGTGCTACTTCTGATTCTCTATTCCACAATAGAAGTTCTACAAGTCAAGTAAAAAGGAAATTGCCCATTGTTGAATTTCCTGATTGCTCTGACAGCAAAACCTTCACCTTCATTGCCCCGTTGATGTTACAGCACAAAAATGAGCAGACTCCAGCTCATACTTTGGTTAACAGAAGACAAGCAATGGGCTTTGCCTTCTCTTACGGGCTCCTGAATGTTTTTCCGCAACCCAAACTGGCTGCTGCAGCTGCCTTGCCCATCCCATGTGAACTGAAAGAAGCTCCCTCTGGTCTTGCTTACTGCGACAAAGTAGTGGGAACTGGTACGGAGGCTCTCAAGGGAAAATTGATAAAGGCACACTATGTTGGGAGATTGGAGAATGGAACAGTCTTCGACAGCAGCTACAACCGTGGAAAACCCCTAACATTTCGGGTTGGAGTTGGTGAGGTCATAAAAGGCTGGGATGAGGGTATAGTAGGAGGTGATGGAGTTCCTCCTATGCTTGCAGGCGGAAAACGCACATTGAAGATCCCTCCACAACTTGGATATGGTACCAGAGGGGCTGGTTGCAGAGGAGGTTCTTGTATCATTCCTCCAGATTCGGTTCTCATATTTGATGTGGAGTTCATCAGCTAG 693 0.4675 MSSLAYSAGTCSQRGISSLGATSDSLFHNRSSTSQVKRKLPIVEFPDCSDSKTFTFIAPLMLQHKNEQTPAHTLVNRRQAMGFAFSYGLLNVFPQPKLAAAAALPIPCELKEAPSGLAYCDKVVGTGTEALKGKLIKAHYVGRLENGTVFDSSYNRGKPLTFRVGVGEVIKGWDEGIVGGDGVPPMLAGGKRTLKIPPQLGYGTRGAGCRGGSCIIPPDSVLIFDVEFIS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02173 230 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 105 229 IPR044183 GO:0009507
Pte13g02173 230 SUPERFAMILY FKBP-like 111 229 - -
Pte13g02173 230 Gene3D - 105 229 IPR046357 GO:0003755
Pte13g02173 230 FunFam Peptidylprolyl isomerase 106 230 - -
Pte13g02173 230 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 128 229 IPR001179 GO:0003755
Pte13g02173 230 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 133 230 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02173 Pte-Chr13 34421551 34424536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02173 133 230 Calmodulin-binding Proteins AT5G48570 43.878 3.82e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02173 K01802 - qsa:O6P43_013364 263.077