Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02147 ATGGGAAGGAACTCCAGCTGGGAACTTGACCTTCATCCTCAAGCCATGTCTGAAACTGATCATGGCCACAATCACAACAACTATTTCAGCCAATCCATGGTACAGAAAGAGCATGAAAGTCGGCAGTATATACAGCAACATCAGCAGAAGCATTCCATAGCCCACAATAATGGAAACAACAGTGTCTGTGATGTTGCAGAACATCAGGCTTTAGCTATGTTCAGTCTTCCAACCAGGGAGATGGATGAAAGAGCGCAAAGGAATTCAACTGTAGCATCAGTAGCATCCTCTCCCATACTGCAGTCTCGTCCTCAATTGTATCATCCAAGCATTGGCCTTGCTATGAAGAGATCACTGCAACGATTTCTAAATAAGAGAAAGAGTCGGATTCAAAGTGCATCTCCATACAATCTGCGATGA 420 0.4405 MGRNSSWELDLHPQAMSETDHGHNHNNYFSQSMVQKEHESRQYIQQHQQKHSIAHNNGNNSVCDVAEHQALAMFSLPTREMDERAQRNSTVASVASSPILQSRPQLYHPSIGLAMKRSLQRFLNKRKSRIQSASPYNLR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02147 139 MobiDBLite consensus disorder prediction 1 21 - -
Pte13g02147 139 Pfam Jas motif 116 136 IPR018467 -
Pte13g02147 139 MobiDBLite consensus disorder prediction 39 60 - -
Pte13g02147 139 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02147 Pte-Chr13 34090267 34091006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02147 1 139 Tify Gene Family AT1G30135 28.873 4.21e-08 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte13g02147 Jas_motif 5.2e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02147 - - tcc:18596482 95.1301