Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02126 ATGTCATTCCAAATTGCAGATAGAAGTGTCAGTGTAATTATGGTGGTAATGCTCTGCCTTTCAGCTGTAGCGTCATCTGCAGACTCGAGCATAGAAGTTGAGATTGAAGCTCTGAAAGCTTTCAAGGATTCTATCACCAATGACACGTTGAGGGCACTTGCAGATTGGGGTGACACCAAGCACCACTGCAACTGGACAGGCATTGCTTGTGACAGATCTAATCATGTCATTTCTATTACCTTGCAAACCAAGCAGCACCAGGGGAAGATATCACCATTCCTCGGAAATCTTTCAAGCCTCCAGGTCCTTGATCTATCTTCAAACTCTTTTACTGGGTTTATTCCAGCTGAATTGGGACTTTGCTCTCAGCTTTCTCAACTCATTCTTTATGAGAATTCTCTTTCAGGTCCTATTCCTCCTGAATTAGGACAACTTAAAAACCTGTTGATACTAGATTTAGGTAGCAACAACTTCAATGGAGGAATCCCTGACACCCTTTGCAACTGTACCTCTTTGTTGGACATTTCTGTCACTCTTAACAATCTCACTGGCACAATCCCATCTGCGGTAGGAAATCTAGTTAACCTTACGCTAATTTTAGCCTATGGAAACCACTTAACTGGTTCCATTCCTTCATCCATTGGCAAGTTGGCAGCTTTGCAAACTCTTGATTTCAGTGAAAACCATCTTTCAGGAGTAATACCCAAAGAGATAGGGAATCTGCTCAACTTAGAGGCTCTTGGTTTGTTTGAAAATTCCCTTGAAGGAGAAATTCCACCTGAATTAAGCCTCTGTAAGAAACTTGTAAATCTTGAATTATACAACAACCAATTGGTAGGTAGCATTCCTATTGAGCTCGGAAATCTAGTTCATTTAGAAACATTGAGGATATACCGTAATAAGTTGAATTCCACAATTCCACCTTCCCTGTATAAATTGAAGTCATTGACTCACTTGGGGCTCTCACAGAACAGATTAGAAGGAACAATAGCTTCTGAAATTGGATCTCTAAGATCATTAGAAGTATTATCCTTACATTCAAATAGTTTTTCTGGACAGATCCCACGTTCAATAACCAACCTGAAAAACTTAACACATCTGTCATTAGACTTCAACAGTTTCTTAGGAGAAATCCCATCAAACATAGGGCTGCTCAATAATTTGAAAAATTTGACAGTAGCTAACAACTTCCTTGAAGGTTCTGTTCCTTCTAGCATCTCAAACTGTACTAGCTTGATAATGATTAGTCTAACTAACAATAGTCTCGCAGGGAACATACCTCAGGGATTATGGAAGTTACCTAATCTGACTTCCTTGTCTTTTGCAAATAACAAAATGTCTGGGGAAATCCCAGATGACCTCTTCAACTGCTCGAGTCTTCGTGTCCTTAGTTTGGCTATAAACAATTTTACTGGAGTTCTGAAACCAGGCATTCAGAAACTTTTCAGTCTGCAGCTTCTTCAACTCAATGTAAATTCATTTGAAGGCCCAATCCCTTCAGAGATTGGCAACTTAAGCCAACTCAATATCTTATCACTTTCAGAAAATCGGCTTTCCGGCCACATTCCAGAAGAAATCTCCAAACTTTCTGACCTCCAAGGTCTCTTTTTGCATGATAATGCATTAGAAGGTGCAATACCTGCTGCAATATCTGAGCTGAAACAACTCACTGAACTTGACTTGAGTAATAACAGGCTGGTTGGTCCAATTCCAGATTCAATATCAAAGCTGGAAATGCTTTCTCTATTAGACCTGCACGGAAATATGCTCAATGCCTCACTTCCATTAAGTATGGAGAAACTTGATCGGCTTTCAGTCTTGGACCTCTCTCACAACCATTTAACAGGATCAATTTCTGGTGCTGTTGTTGCTAGTTTTAAAAACATGCAGATGTATCTGAACCTCTCATATAATTACTTGGAAGAAAGCATTCCTGATGAGTTTGGTACGTTGGAAATGGTACAAGCAGTTGATCTTTCAAACAATAATCTATCTGGAGTCATCCCTAAAACTCTTGTAGGATGCAGAAACTTGTTAAATCTTGATCTTTCAGGAAACAAACTATCTGGTCCAATTCCTGCCAATGCTTTTGCGAAAATGGACATGATTCAAAGCTTAAATCTTTCCAGAAATGACTTAGAAGGTGAAATTCCTGAAACATTAGCTAATCTCAGGAATATTAGTTCCATAGATCTTTCTCAGAATTTCTTGAAAGGCATAATTCCTCAGAGCTTTGCTAATCTTTCCTCTCTGAAGCATCTAAATCTCTCTTTCAACCAGCTTGAAGGTAATGTTCCAGACACCGGAATATTCCAGTATGTAAATGCTTCTGATTTGGTTGGCAATCGAGCTCTTTGTGGAACAAAATTCCTTGGCTCTTGCAGGTTGGCAACTTCTCATCATCTATCCAAGAAGGCTGTGTCTATCGTTGTGGCACTTGGATCGGTTTCTCTAATTCTAACTCTGCTTCTCCTATTGCTTTTGATCCTGCACCAAAGGTCGAAATCGCCCAAACCAGATCCAGTTGAAGATCTGGAATCGCTATGCCCTAAGGTGGGGACACTCAAACGATATGACGTGAAGGAATTAGAAAATGCTACTAATTTCTTCAGTGCGGACAACATTATTGGTTCTAGCAATTTGAGCACTGTGTACAAGGGTCAATTGGAAGATGGAAATACTGTAGCAGTCAAAAAATTGAACCTGAAGCAGTTCTGTGTAGAATCTGATAAGATATTCAAGAGAGAGATCAAGACCCTCAGCCAACTGCGACATAGAAATTTGGTTAAGGTACTTGGATATTCGTGGGTGAGTGAGAAGATTAAAGCTTTGGTTTTGGAGATGATGCAGAATGGGAGCTTGGACAATTTAATACATGATAGTACTGAGATAGATCAATCAAGATGGACAGTAGATGAAAGAGTCAAGGTTTGCATCTCCATTGCAAGTGGTCTGGATTACTTGCACTCTGGATATGATTTTCCGATCGTACATTGTGATTTAAAGCCTTCAAACATCCTTTTAGATACAGAATGGGAGGCTCATGTGAGTGATTTCGGCACAGCTCGGATTCTTGGTATTCATCTGCAGGATGGCAAGAGTGTTTCTTCATCAATAGCGTTGGAGGGTACCATTGGCTATATGGCACCAGAGCTAGCCTACATGGGGAAAGCGACCACTAAAGTTGATGTCTACAGCTTTGGTGTCATTATTATGGAGTTCCTAGCAAAAAGAAGGCCTACGGCATTTGCAGAGAAGGATGGCATTTCAATCAGTCTGCGTCAACTTGTAGAGGAAGCTCTTGTTCACGGAGAAGAAGGACTCGTTCAAATTCTGGACCCTATATTAGCAAAGGATATCTCTGGGAAACATGAAGTGTTGCAGGAACTCTTCAGACTGGCCTTATGGTGCACCCTCTCAAATCCTGATGATCGACCTGACATGAATGCGGTCTTATCTGCCCTGAAGAAGCTCAAAAGACCAGAAAATTAA 3492 0.4041 MSFQIADRSVSVIMVVMLCLSAVASSADSSIEVEIEALKAFKDSITNDTLRALADWGDTKHHCNWTGIACDRSNHVISITLQTKQHQGKISPFLGNLSSLQVLDLSSNSFTGFIPAELGLCSQLSQLILYENSLSGPIPPELGQLKNLLILDLGSNNFNGGIPDTLCNCTSLLDISVTLNNLTGTIPSAVGNLVNLTLILAYGNHLTGSIPSSIGKLAALQTLDFSENHLSGVIPKEIGNLLNLEALGLFENSLEGEIPPELSLCKKLVNLELYNNQLVGSIPIELGNLVHLETLRIYRNKLNSTIPPSLYKLKSLTHLGLSQNRLEGTIASEIGSLRSLEVLSLHSNSFSGQIPRSITNLKNLTHLSLDFNSFLGEIPSNIGLLNNLKNLTVANNFLEGSVPSSISNCTSLIMISLTNNSLAGNIPQGLWKLPNLTSLSFANNKMSGEIPDDLFNCSSLRVLSLAINNFTGVLKPGIQKLFSLQLLQLNVNSFEGPIPSEIGNLSQLNILSLSENRLSGHIPEEISKLSDLQGLFLHDNALEGAIPAAISELKQLTELDLSNNRLVGPIPDSISKLEMLSLLDLHGNMLNASLPLSMEKLDRLSVLDLSHNHLTGSISGAVVASFKNMQMYLNLSYNYLEESIPDEFGTLEMVQAVDLSNNNLSGVIPKTLVGCRNLLNLDLSGNKLSGPIPANAFAKMDMIQSLNLSRNDLEGEIPETLANLRNISSIDLSQNFLKGIIPQSFANLSSLKHLNLSFNQLEGNVPDTGIFQYVNASDLVGNRALCGTKFLGSCRLATSHHLSKKAVSIVVALGSVSLILTLLLLLLLILHQRSKSPKPDPVEDLESLCPKVGTLKRYDVKELENATNFFSADNIIGSSNLSTVYKGQLEDGNTVAVKKLNLKQFCVESDKIFKREIKTLSQLRHRNLVKVLGYSWVSEKIKALVLEMMQNGSLDNLIHDSTEIDQSRWTVDERVKVCISIASGLDYLHSGYDFPIVHCDLKPSNILLDTEWEAHVSDFGTARILGIHLQDGKSVSSSIALEGTIGYMAPELAYMGKATTKVDVYSFGVIIMEFLAKRRPTAFAEKDGISISLRQLVEEALVHGEEGLVQILDPILAKDISGKHEVLQELFRLALWCTLSNPDDRPDMNAVLSALKKLKRPEN* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02126 1163 SMART serkin_6 870 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02126 1163 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 31 184 - -
Pte13g02126 1163 SUPERFAMILY RNI-like 306 639 - -
Pte13g02126 1163 SUPERFAMILY L domain-like 570 788 - -
Pte13g02126 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Pte13g02126 1163 FunFam MDIS1-interacting receptor like kinase 2 isoform A 185 282 - -
Pte13g02126 1163 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 949 1163 - -
Pte13g02126 1163 SUPERFAMILY RNI-like 79 399 - -
Pte13g02126 1163 CDD STKc_IRAK 876 1158 - -
Pte13g02126 1163 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Pte13g02126 1163 Gene3D Phosphorylase Kinase; domain 1 841 947 - -
Pte13g02126 1163 Gene3D Ribonuclease Inhibitor 476 698 IPR032675 -
Pte13g02126 1163 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 527 1159 - -
Pte13g02126 1163 Gene3D Ribonuclease Inhibitor 378 475 IPR032675 -
Pte13g02126 1163 Gene3D Ribonuclease Inhibitor 270 377 IPR032675 -
Pte13g02126 1163 SUPERFAMILY Protein kinase-like (PK-like) 849 1155 IPR011009 -
Pte13g02126 1163 SMART LRR_typ_2 97 121 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 289 313 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 675 699 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 724 747 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 217 241 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 505 529 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 361 385 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 748 773 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 553 577 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 651 674 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 145 169 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 601 624 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 337 360 IPR003591 -
Pte13g02126 1163 SMART LRR_typ_2 433 457 IPR003591 -
Pte13g02126 1163 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Pte13g02126 1163 Pfam Leucine rich repeat 387 445 IPR001611 GO:0005515
Pte13g02126 1163 Pfam Leucine rich repeat 655 713 IPR001611 GO:0005515
Pte13g02126 1163 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Pte13g02126 1163 Pfam Leucine rich repeat 718 761 IPR001611 GO:0005515
Pte13g02126 1163 ProSiteProfiles Protein kinase domain profile. 870 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02126 1163 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 381 474 - -
Pte13g02126 1163 SMART LRR_sd22_2 505 528 - -
Pte13g02126 1163 SMART LRR_sd22_2 97 118 - -
Pte13g02126 1163 SMART LRR_sd22_2 724 750 - -
Pte13g02126 1163 SMART LRR_sd22_2 385 411 - -
Pte13g02126 1163 SMART LRR_sd22_2 553 582 - -
Pte13g02126 1163 SMART LRR_sd22_2 313 336 - -
Pte13g02126 1163 SMART LRR_sd22_2 265 286 - -
Pte13g02126 1163 SMART LRR_sd22_2 337 363 - -
Pte13g02126 1163 Pfam Leucine Rich Repeat 99 118 IPR001611 GO:0005515
Pte13g02126 1163 Gene3D Ribonuclease Inhibitor 699 797 IPR032675 -
Pte13g02126 1163 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 617 798 - -
Pte13g02126 1163 PRINTS Leucine-rich repeat signature 556 569 - -
Pte13g02126 1163 PRINTS Leucine-rich repeat signature 601 614 - -
Pte13g02126 1163 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 842 948 - -
Pte13g02126 1163 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 475 570 - -
Pte13g02126 1163 Pfam Protein kinase domain 872 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02126 1163 Gene3D Transferase(Phosphotransferase) domain 1 949 1163 - -
Pte13g02126 1163 FunFam MDIS1-interacting receptor like kinase 2 isoform A 283 380 - -
Pte13g02126 1163 Gene3D Ribonuclease Inhibitor 191 268 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02126 Pte-Chr13 33876074 33880371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02126 27 1163 Receptor kinase-like Gene Family AT5G46330 53.733 0.0 1174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pte13g02126 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02126 K13420 - jre:108990254 1483.77