Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02113 ATGTATAGCCTTTCATCAGCTTATAACTCTCAGGTCTATCAACCATTTTACACAACATTGACCGACTGTTTGCAAGGATCTGTGGATTATGGTTCACTTGCAGCAGCTTTTGGAATGTCTCCTTCGTCATCTGAAGTCTTCTCATCAGTGGAAGGTAAACAAAAGCCTGCAGGAGTTGGTCATGCAATGGGAGGTGGTGATAATCTTTCAGCTGCAAACTCTTCCATATCTTCCTATTCGTTTGGAGCTGGGGCCGAAGAAGAGTCTGACAAAAGTAAACAAGATATCCATCTGATTAAAGGAGAAGATGGAGGAGAAAGCTATAAGCAAGTCAAGGGCGACAAGATCAAAGGGGACAAGAAAGAGAGAGATCCTAGGTTTGCGTTCATGACAAAGACTGAAGTTGATCATCTAGACGATGGATACAGATGGAGAAAATATGGACAGAAGGCCGTCAAGAATAGCTCTTATCCAAGAAGCTATTACAGGTGCACAACTAAAAAGTGCACTGTGAAGAAAAGGGTTGAGAGGTCATTCGAAGATCCATCCATGGTGATTACAACATACGAGGGTAAACATAACCATCAAGTCCCGACATCACTCAGAGGAAATGCTGCTGCATTTTTCACACCTTCTATTCTGATATCAACGCCGCCTGTGTTAACAAGGTCAAGGTTTCCTCACGATTTGTTTATGCAAATGCCTACCACTCACACAAGCAGACAAAGAGGACTATCTTCCATTTATTCAAACATTGGTTGTCTTGAACAGTATCAAAATTCTGATTATGGCTTATTGCAAGACATTGTTCCATCAGTTCTCCTTAAAGAACAGCCATACCAGTAG 846 0.4173 MYSLSSAYNSQVYQPFYTTLTDCLQGSVDYGSLAAAFGMSPSSSEVFSSVEGKQKPAGVGHAMGGGDNLSAANSSISSYSFGAGAEEESDKSKQDIHLIKGEDGGESYKQVKGDKIKGDKKERDPRFAFMTKTEVDHLDDGYRWRKYGQKAVKNSSYPRSYYRCTTKKCTVKKRVERSFEDPSMVITTYEGKHNHQVPTSLRGNAAAFFTPSILISTPPVLTRSRFPHDLFMQMPTTHTSRQRGLSSIYSNIGCLEQYQNSDYGLLQDIVPSVLLKEQPYQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02113 281 ProSiteProfiles WRKY domain profile. 133 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g02113 281 MobiDBLite consensus disorder prediction 83 120 - -
Pte13g02113 281 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 232 IPR044810 GO:0003700
Pte13g02113 281 MobiDBLite consensus disorder prediction 86 120 - -
Pte13g02113 281 Pfam WRKY DNA -binding domain 139 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g02113 281 SUPERFAMILY WRKY DNA-binding domain 130 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g02113 281 SMART WRKY_cls 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g02113 281 FunFam WRKY transcription factor 57 124 198 - -
Pte13g02113 281 MobiDBLite consensus disorder prediction 46 66 - -
Pte13g02113 281 Gene3D WRKY domain 123 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02113 Pte-Chr13 33766584 33768178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02113 13 279 WRKY Transcription Factor Family AT4G18170 45.423 3.77e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g02113 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02113 - - qsu:111998523 318.546