Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02101 ATGATATCTGGCTTACAGCACCCAAACCTTGTGAAATTATATGGATGCTGTATTGAAGGGAAACAACTCTTGCTGGTGTATGAATACATGGAAAACAACAGTCTTGCACATGCTTTGTTTGGCTCCAAAAAAGATGGTACGGAACTGGATTGGCCTACAAGGCAAAAGATTTGCGTTGGCATGGCAAGAGGCCTAGCTTTCCTTCATGAGGAATCTACAATAAAGATTGTTCATAGAGATATCAAGACTCACAATGTACTACTGGACACAGATCTTAACCCCAAGATTTCAGACTTCGGTTTGGCAAAGCTTGATGAAGAAGATAACACTCACATAACCACCAGAATCGCTGGAACTATAGGGTACATGGCACCAGAGTATGCATTATGGGGTCATTTAACTTATAAGGCAGATGTCTACAGTTTTGGAGTTGTTGCATTGGAGATAGTTGCTGGCAAGAACAACACCAATTATGGACCAAATGAGGACTTTGTATGCCTTGTTGATTGGGCACTTGTATTACAGCAAAAAGGAAACCTAATGGAGCTAGTAGATCCAAAGTTAGGGACCAACTTCAACCAGGAAGAGGTAGTGAGAATGATAAGAGTAGCTCTACTATGCACTAATCCTTCACCGGCACTTAGACCAACCATGTCTGCAGTGGTAAGAATGCTTGAAGGCCACACCATGGTTCCTCAACTAATCATGGATCCAAGCATATATGGTGATGAACTCAGGTTAAAAGCCTTGATGAATCAATCTTATCATTTTCCACAGCCACAAGAAAGCTCTTGTGAAACTGAGAGTCTCATCCATACTACAAAAGCCACATGGGATGAATCCCATAACAGCACATCATCACTATCCAATCATTAA 876 0.4132 MISGLQHPNLVKLYGCCIEGKQLLLVYEYMENNSLAHALFGSKKDGTELDWPTRQKICVGMARGLAFLHEESTIKIVHRDIKTHNVLLDTDLNPKISDFGLAKLDEEDNTHITTRIAGTIGYMAPEYALWGHLTYKADVYSFGVVALEIVAGKNNTNYGPNEDFVCLVDWALVLQQKGNLMELVDPKLGTNFNQEEVVRMIRVALLCTNPSPALRPTMSAVVRMLEGHTMVPQLIMDPSIYGDELRLKALMNQSYHFPQPQESSCETESLIHTTKATWDESHNSTSSLSNH* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02101 291 SUPERFAMILY Protein kinase-like (PK-like) 3 256 IPR011009 -
Pte13g02101 291 Gene3D Transferase(Phosphotransferase) domain 1 31 236 - -
Pte13g02101 291 CDD STKc_IRAK 1 227 - -
Pte13g02101 291 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 261 - -
Pte13g02101 291 Pfam Protein tyrosine and serine/threonine kinase 2 225 IPR001245 GO:0004672|GO:0006468
Pte13g02101 291 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 237 - -
Pte13g02101 291 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02101 291 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Pte13g02101 291 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02101 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02101 Pte-Chr13 33686543 33688054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02101 1 288 Receptor kinase-like Gene Family AT1G53440 64.384 1.18e-122 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte13g02101 PK_Tyr_Ser-Thr 5.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02101 - - qsa:O6P43_032039 458.373