Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02078 ATGACCATAATCCAACATCCTCAGAACCAGTTGTTATTCATTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCCTCTTTCTGCCAGATAAGGAGATGTCTGCTGTTGTCAATGGAAACGATCAGCTCACTGGGCATATAATATCTACAACAATAGGAGGGAAAAATGGAGAGCCCAAGCAGACCATTAGTTACATGGCAGAGCGTGTTGTAGGGACAGGATCCTTTGGAATTGTCTTCCAGGCAAAATGCTTGGAAACTGGGGAGACGGTGGCCATAAAGAAGGTATTGCAGGACAAAAGATATAAGAATCGTGAGTTGCAGCTTCTGCGCGTGATGGACCATCCTAATGTGGTCTCTCTGAAGCATTGTTTCTCTTCCACGACAAATAGAGACGAACTGTTCCTCAATTTGGTTATGGAATATGTTCCGGAGTCAATGTATGGAGTCTTGAAGCATTACAGCAATTCTAGTCAGAGAATGCCACTTATTTATGTAAAGCTTTATATGTACCAGATCTTCAGGGGATTGGCGTATATCCATACTGTTCCTGGAGTTTGCCACCGAGACTTGAAGCCTCAAAATCTTCTGGTTGATCCTCTTACTCATCAGGTTAAGCTATGTGACTTTGGAAGTGCAAAAGTACTGGTCAAAGGTGAAGCCAATATATCTTACATATGTTCCCGTTTCTATCGAGCTCCAGAGCTTATATTTGGTGCGACTGAATATACTACCTCAATTGATATTTGGTCTGCTGGTTGTGTCCTTGCTGAACTTCTTCTTGGCCAGCCATTGTTCCCTGGAGAAAATGCTGTGGACCAGCTTGTTGAGATTATAAAGGTTCTTGGTACACCCACACGAGAGGAAATCCGCTGTATGAATCCAAATTATAATGATTTCAGGTTTCCACAGATAAAGGCACACCCATGGCACAAGATTTTCCACAAAAGAATGCCTCCTGAAGCCATCGATCTGGCCTCAAGGCTCCTTCAGTACTCCCCAAGTCTTAGATGTACAGCGTTGGAAGCTTGTGCACATTCCTTCTTTGATGAACTACGAGAACCAAATGCTCGCTTACCCAATGGTCGTCCGTTACCGCCATTATTCAATTTCAAACAAGAGATTGCGGGTGCGGGTGCATCTCCAGAGCTCGTTAATAAGTTAATACCTGACCATGTAAAGCGGCAAATGGGTCTAAATATGCACTTGTCGGGTACATAA 1230 0.435 MTIIQHPQNQLLFISLLSLSLSLSLSHFLFLPDKEMSAVVNGNDQLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQLLRVMDHPNVVSLKHCFSSTTNRDELFLNLVMEYVPESMYGVLKHYSNSSQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYNDFRFPQIKAHPWHKIFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHSFFDELREPNARLPNGRPLPPLFNFKQEIAGAGASPELVNKLIPDHVKRQMGLNMHLSGT* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02078 409 Gene3D Phosphorylase Kinase; domain 1 53 147 - -
Pte13g02078 409 Gene3D Transferase(Phosphotransferase) domain 1 148 397 - -
Pte13g02078 409 SMART serkin_6 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02078 409 FunFam Glycogen synthase kinase-3 beta 52 147 - -
Pte13g02078 409 SUPERFAMILY Protein kinase-like (PK-like) 67 374 IPR011009 -
Pte13g02078 409 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 37 399 - -
Pte13g02078 409 FunFam Shaggy-related protein kinase kappa 148 397 - -
Pte13g02078 409 ProSiteProfiles Protein kinase domain profile. 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02078 409 Pfam Protein kinase domain 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02078 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pte13g02078 409 ProSitePatterns Protein kinases ATP-binding region signature. 74 98 IPR017441 GO:0005524
Pte13g02078 409 CDD STKc_GSK3 63 355 IPR039192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02078 Pte-Chr13 33390374 33396872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02078 74 355 Core Cell Cycle Gene Families AT3G48750 36.082 6.02e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte13g02078 Pkinase 2.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02078 K14502 - rcu:8275153 715.687