Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02077 ATGGAAGATGTGAATGTGAGAATTTGGCTTACCTTATGCATCTTCTTCCTGTGGGCTTGGGCACCTATGGCTGGAGGAACTGACAGCCTGCTTTCTCCCAAGGGTGTGAACTATGAAGTGGCTGCTTTGATGTCGTTGAAGAGTAAAATGAAAGACGAATTGCATGTGATGGATGGTTGGGATCTTAACTCGGTTGACCCTTGTACTTGGAACAGAGTGGGTTGCTCTCCAGAGGGTTTTGTGATTTCCCTTACGATGACAGATAATAGTTTATCTGGCACACTCTCACCGAGTATTGGGAACTTGACCCACCTTAGAACAATGTTAATGCAGAATAACCATTTAACTGGTCCAATTCCTGCCGAGATTGGGAACCTCATTGAGCTTCAGACTCTTGATCTTTCTGGTAACCTGTTTGTTGGTGAAATTCCTAATTCTTTGGGCTTCTTGACTCATCTAAATTACTTGCGGCTCAGCAGAAACAGATTGTCAGGACCAATACCTCAACATATAGCAAATCTCTCTAACCTTGTATTCCTGGATTTGTCATTTAACAACCTCAGTGGTACTACTCCAAAGATTTTAGCCAAAGGCTATAGTATTACTGGGAACAACTTCCTTTGTGCATCATCGTCACCACAAGCTTGCTTGGACGTGTCATCACCAGTAAATGGAGCAGGGTCTTTCGAGAAGGTTGGCAGTCATCCCAGATGGGTGCTTTCTGTTGCTATTGCAGTCGGTTGCTCAGTCGTGATTTCCATCACATTGCTCATCTTTTGGCTGCATTGGCACCGGCTACACATACTTTATGCTTCTTATGTGCAGCAAGATTATGAATTTGAAATGGGCCATTTAAGAAGGTTTTCACTTCGTGAACTGCAAATTGCTACTGCCAATTTTAGTCCCAAAAACATTCTTGGACAGGGTGGATTTGGAGTGGTCTATAAAGGATGCCTTCCAAATAAAATGATGGTGGCAGTAAAAAGGCTCAAAGATCCCAATTACACTGGCGAAGTGCAATTTCAAACAGAAGTTGAGATGATTGGCTTGGCTTTGCACCGAAACCTGTTGCGCTTGTGTGGGTTTTGCATGACCTCAGATGAAAGATTACTCGTTTATCCATACATGCCCAATGGCAGTGTTGCAGATCGCTTGAGAGATTCTGGCCAGGAAAAGCCATCTTTGGATTGGAATAGGCGAATGCGTATTGCCATTGGGGCTTCTCGTGGACTTTTGTACTTACATGAGCAATGTAACCCCAAAATTATTCACAGAGACGTCAAGGCCGCAAACATTTTGCTTGATGAAAGTTTTGAAGCTGTGGTTGGTGATTTTGGTCTTGCAAAGTTGTTAGACCAGAGAGAGTCCCATGTCACCACTGCAGTACGAGGAACCGTAGGGCACATTGCACCAGAATATCTCTCAACTGGACAGTCTTCAGAGAAAACTGACGTATTTGGATTTGGCATTTTGCTTTTGGAACTCATAACTGGACAAAAAACGTTAGATGCTGGGAATGGTCAGGTTCAGAAGGGAATGATTATTGACTGGGTTAGAACATTGCACGAGGAAAAGCGGCTGGATATCCTAGTTGACCGGGATCTAAAGGGTTGCTTTGATTCAGCAGAGCTGGAGAAAACAGTAGATGTTGCATTACAGTGTACTCAGTCCAATCCAAATCTTCGGCCAAAGATGTCTGAAGTCTTGAAAATTCTTGAAGGTCTTGTTGGACAGTCAGGGAATACTGATGAATCACAAGGAGGAGCCAGCCTTAATGAGGTAATGGGTTGTAGTTTCTCAAGACATAGTAGTGATGTTCATGAAGATTATTCATTCATAATAGAAGCCATTGAGCTATCAGGACCTAGATGA 1872 0.4322 MEDVNVRIWLTLCIFFLWAWAPMAGGTDSLLSPKGVNYEVAALMSLKSKMKDELHVMDGWDLNSVDPCTWNRVGCSPEGFVISLTMTDNSLSGTLSPSIGNLTHLRTMLMQNNHLTGPIPAEIGNLIELQTLDLSGNLFVGEIPNSLGFLTHLNYLRLSRNRLSGPIPQHIANLSNLVFLDLSFNNLSGTTPKILAKGYSITGNNFLCASSSPQACLDVSSPVNGAGSFEKVGSHPRWVLSVAIAVGCSVVISITLLIFWLHWHRLHILYASYVQQDYEFEMGHLRRFSLRELQIATANFSPKNILGQGGFGVVYKGCLPNKMMVAVKRLKDPNYTGEVQFQTEVEMIGLALHRNLLRLCGFCMTSDERLLVYPYMPNGSVADRLRDSGQEKPSLDWNRRMRIAIGASRGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKTLDAGNGQVQKGMIIDWVRTLHEEKRLDILVDRDLKGCFDSAELEKTVDVALQCTQSNPNLRPKMSEVLKILEGLVGQSGNTDESQGGASLNEVMGCSFSRHSSDVHEDYSFIIEAIELSGPR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02077 623 Gene3D Transferase(Phosphotransferase) domain 1 376 582 - -
Pte13g02077 623 FunFam Putative LRR receptor-like serine/threonine-protein kinase 36 218 - -
Pte13g02077 623 Pfam Protein kinase domain 303 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02077 623 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Pte13g02077 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Pte13g02077 623 SMART serkin_6 300 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02077 623 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Pte13g02077 623 Gene3D Phosphorylase Kinase; domain 1 270 375 - -
Pte13g02077 623 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Pte13g02077 623 FunFam Somatic embryogenesis receptor-like kinase 1 376 589 - -
Pte13g02077 623 SUPERFAMILY L domain-like 38 201 - -
Pte13g02077 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 30 571 - -
Pte13g02077 623 SUPERFAMILY Protein kinase-like (PK-like) 281 573 IPR011009 -
Pte13g02077 623 Gene3D Ribonuclease Inhibitor 36 218 IPR032675 -
Pte13g02077 623 FunFam Somatic embryogenesis receptor kinase 1 270 375 - -
Pte13g02077 623 ProSiteProfiles Protein kinase domain profile. 300 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02077 Pte-Chr13 33384304 33389606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02077 44 624 Receptor kinase-like Gene Family AT5G45780 70.619 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pte13g02077 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02077 - - qsa:O6P43_012793 997.653