Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02058 ATGCACCGGCATATGATAATGGCAGATGTTTTCAGAGTACTATTTACAGTAGCTGCCTTCTTCCCAATCCCAAGCTATGTATTGAGTACAGGCACAGCGAGCTACACTTCAATCTACAGTTTTGGAGATTCTTGGGCTGACACAGGGAATACATATTACCTATTCAAATCTCGAAACACCTCAAATAGTTGCATGAAGCTTCCATATGGAGAAGACTTCTTTGGAAACTCCACTGGGAGATGTTCTAATGGTCGATTGGTCATTGATTTCATTGCTCAGCATCTGGGATTGCCGTATGTGAAACCATATTTTGGCATTGGGATAGGCAATGCGACAGATACAAACATTCAGGAGGGTGTGAATTTTGCTATAGCAGGAGCTACTGCATTGGACCCAAGTTTCTTTGAAAAAAGGAGAATCCCTTTTCCCAAAGGATATTGTCTGAGAGATCAGTTTGATTGGTTCAAGAAGTTCCTTCCTTCTCTCTGTTCATCACCTTCAAGCTGCAGACATGTTTTCAGTAACTCCTTATTCTTGATGGGCGAGATCGGAGGAAATGATTACTTGTTTGCTTCCGGCGCAAGAAAAGGAAAAGAAGAACTTACATCCATGATACCTGAAGTTATTAACACAATCATTTCAGCTGTCAAGGAGTTGGTAAATCTCGGAGCAGTGACACTTGTGGTTCCTGGGACTATTCCAATTGGGTGTAATTCAATTATCTTAACAATTCATGAGGGCACCCAGAAGGAAGAATATGATCAATTTGGTTGTATCAAGTGGTTCAATAAATTTGCTGAACATCATAACGAACAGCTTCAAACTGAATTACATAATCTCAGAATGCTTTATCCTCATGTCAATATCTTTTACGGTGATTATTACAGTGTTTTGTTGAAGCTTGTCCATTCTCCAACTAAATTCGGACTTGTGGATGGATTGGTTCCATTGAAATGTTGCTGTGGAGGGGGAGGGGTATATGACTACAATATGTCGATACAATGTGGCAATCGAAGAGCAAAAGTTTGCGACGATCCTTCACGATATGTGTACTGGGATGGTGCTCATCTCACAGAAGCTGCATATAGATGGATAGCTAAAAGCTTATTGGCAAAGGAACCATTTTCTACAATTCTGGAAATGACTCCTCCTACTCATACACCATACCTTTCTTGA 1176 0.4048 MHRHMIMADVFRVLFTVAAFFPIPSYVLSTGTASYTSIYSFGDSWADTGNTYYLFKSRNTSNSCMKLPYGEDFFGNSTGRCSNGRLVIDFIAQHLGLPYVKPYFGIGIGNATDTNIQEGVNFAIAGATALDPSFFEKRRIPFPKGYCLRDQFDWFKKFLPSLCSSPSSCRHVFSNSLFLMGEIGGNDYLFASGARKGKEELTSMIPEVINTIISAVKELVNLGAVTLVVPGTIPIGCNSIILTIHEGTQKEEYDQFGCIKWFNKFAEHHNEQLQTELHNLRMLYPHVNIFYGDYYSVLLKLVHSPTKFGLVDGLVPLKCCCGGGGVYDYNMSIQCGNRRAKVCDDPSRYVYWDGAHLTEAAYRWIAKSLLAKEPFSTILEMTPPTHTPYLS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02058 391 Coils Coil 263 283 - -
Pte13g02058 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 21 374 - -
Pte13g02058 391 SUPERFAMILY SGNH hydrolase 37 370 - -
Pte13g02058 391 Gene3D SGNH hydrolase 28 373 IPR036514 -
Pte13g02058 391 CDD SGNH_plant_lipase_like 36 370 IPR035669 -
Pte13g02058 391 Pfam GDSL-like Lipase/Acylhydrolase 38 368 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02058 Pte-Chr13 33176468 33191313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02058 25 370 Pollen Coat Proteome AT1G75910 27.147 1.45e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02058 - - qsa:O6P43_012744 390.578