Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02057 ATGGCACAACTATTACGGTCACTTTCATCATATCCTGTTCTCATGCTTCTCTGCTGCTTCATTCTCTTCACTCTGCCCTCCACAACTCTCTCTCTCAACCAAGAAGGCCTCTACCTTCACCAATTCAAGCTCTCTCTTGATGACCCATCTTCCTCACTTTCCTCGTGGAGTGAACTTGATGACACGCCCTGTAATTGGTTTGGTGTTCAGTGCGATAACGCTACTCACTCTGTCAATTCCATTGATCTCTCTAGTGCAAATGTTGCTGGCCATCTTGACCCTGACCTTATCTGCAGCTTAACCGAGCTAACTTCTCTTATCCTCTTCAACAACTCCATTAACTCCACACTCTCGACGAATATATCACTCTGTCAAAGTCTCTCTCACCTTGATCTCTCTCAGAATCTGCTTACTGGGTTTCTGCCCCACACACTAGCTGAACTTCCTAACCTCAAATACTTGGACTTGACTGGTAATAACTTCTCTGGTGAGATACCAAGTAGCTTCGGGAAGTTTCAAAAGATTGAAGTTCTTTCTTTAGTTTACAATCTGTTAGACGGGTCGATTCCTGCTTTTCTCGGCAACATCACGTCACTCAAAATGCTGAACCTTTCATATAATCCATTTGTACCTGGTCGGATCCCGTGGGAGTTTGGGAACTTGACGAATCTTGAGGTGTTGTGGTTGACGCAGTGTAATCTTGTGGGGACGATTCCCGACTCACTTGGGAATTTGAAAAAGCTAAAAGATTTGGACCTGGCTTTGAATAACCTCTATGGTTCTATTCCGAGCTCCATTACCGAGTTAACCAGCGTGAAACAGATTGAGTTGTATAACAACTCATTGTCCGGCGAGTTTCCGGTGGGAATGTCGAAGCTGACTGAGTTGAGGCTGCTTGACGCATCCATGAACCAGCTAACTGGGACGATTCCTGACGAGCTGTGTAGTTTGCCATTGGAGAGTCTCAATCTCTATGAGAACCAGTTCGAAGGTGAGCTGCCAGAAAGCATAGCCAACTCGCCTAACCTGTATGAGCTCCGGTTGTTCGGAAACAAACTACGTGGTAGCTTGCCAAAAAGTCTCGGAAACAACTCGCCGTTGAAATGGCTGGATCTTTCTAACAACTTCTTCTCCGGCGAGCTCCCGCCAACTCTGTGTGACAATGGAATGCTGGAGGAACTGCTTATGGCTTATAACTCTTTTACTGGGGACATTCCAGCTACTCTAGGTGCGTGTCAGAGTTTGACCCGGGTCCGTCTTGGGTACAATCGGTTCACCGGCGATGTTCCGGTGGGCATGTGGGGTCTTCCACATGTATATCTTCTCGAACTAATTGACAACTCTTTTTCTGGTCCAATATCTAAGACCATTGCGGGTGCTTCAAATCTCTCACAGTTGATAATTTCTAAGAACAACTTCTCAGGTACATTACCAGAAGAAATCGGATGGTTGGAAAATCTGGTCGAGTTTTCTGCTAATGATAACAGCCTCACAGAGTCTTTGCCTGATAGTATTGTGAATCTTGAACAACTTGGAATTCTCAATCTCCATAACAATGAGCTTTCCGGTGAGCTTCCTAGTAAGATTAGGACTTGGAAGAAGCTCAATGAGCTAAATTTAGCCACTAACAAATTTACTGGCAAAATCCCGGAAGACATTGGGAGTTTGTCTGTGCTAAACTTTCTTGATCTTTCAAGGAATCAACTTTCTGGGAATATACCATTGTCTTTGCAGAACCTGAAGCTCAATCAACTTAATCTGTCTTTTAATAGATTGTCTGGAGAACTTCCTCCCCAGTTGTCAAGGGATATGTACAAAAACAGTTTTCTCGGTAATAGTGGTTTATGTGGACACGTAGATGGTTTTTGTGATGGTAATGGTCAAGCAAAAGAAATAGTTTATATTTGGCTGTTCAAAGCAATTTTTTTTATTGCTTCTTTTGTGTTTGTTGCTGGGGTGGTGTGGTTCTACTTCAAGTACAAAAACTTCAAGATGGCAAAAAGAGCTTGTGATAAATCAAAGTCGATATTAATGTCGTTTCACAAACTGAGTTTTAGTGAACGTGAGATTTTGGATTGTCTTGATGAAGATAATGTGATTGGGAGAGGATCCGCTGGAAAAGTTTACAAAGTTGTGCTTGGCAATGGAGAGGTAGTTGCCGTGAAGAAGCTTTCAGGAGGCGCAAAGAAGGAAATTGAAAGTGGAGGTGTTAAGAAAGGTGAGGTTCTTCGTGATAATGCTTTCGATGCTGAGGTTGAGACTTTGGGGAAGATCAGACATAAAAACATTGTAAAGCTATGGTGCTGTTGTGTCACTAGAGATTGCAAGCTCTTGGTTTATGAATACATGCCTAATGGTTCTTTGGGAGATCTGTTACACAGTAGCAAAGGAGGGTTGTTGGATTGGCTTACGAGGTATAAGATAATTGTTGATGCAGCTGATGGATTATCTTATTTGCATCACGATTGTGTTCCTCCAATTGTTCACAGAGATGTTAAGTCCAGTAATATTTTGTTGGATGGAGAATTCGGAGCAAGGGTGGCTGATTTCGGAGTAGCTAAGGTAATTGAAGCTGCTGGCAAGGGTACCAAGTCTATGTCTGTCATAGCTGGATCATGTGGTTACATTGCTCCAGAATATGCTTACACTCTGAGAGTTAATGAGAAGAGCGACATTTACAGTTTCGGCGTGGTAATCCTTGAGTTAGTCACTGGAAAGCGCCCAGTAGACCCTGAATTTGGTGAAAAGGATTTGGTGAAGTGGGTGTGCACCACTTTGGATCAGAAAGGTGTGGACCATGTAATTGATCCGAAACTTGATTCTTGTTTCAAAAAAGAAATATGCAAGGTCCTCAACGTTGGTCTCATGTGCACTAGCCCTCTTCCAATCAACCGCCCTTCAATGAGAAGAATAGTGAAGCTGTTGCAAGAGATAGGTGGAGATAATCTGTCCAAGAGTGTCAAGAAAAATGGGAAACTGACGCCTTACTACTATGATGACGCCTCCGATCATGACAGTGTTGCTTGA 3027 0.4315 MAQLLRSLSSYPVLMLLCCFILFTLPSTTLSLNQEGLYLHQFKLSLDDPSSSLSSWSELDDTPCNWFGVQCDNATHSVNSIDLSSANVAGHLDPDLICSLTELTSLILFNNSINSTLSTNISLCQSLSHLDLSQNLLTGFLPHTLAELPNLKYLDLTGNNFSGEIPSSFGKFQKIEVLSLVYNLLDGSIPAFLGNITSLKMLNLSYNPFVPGRIPWEFGNLTNLEVLWLTQCNLVGTIPDSLGNLKKLKDLDLALNNLYGSIPSSITELTSVKQIELYNNSLSGEFPVGMSKLTELRLLDASMNQLTGTIPDELCSLPLESLNLYENQFEGELPESIANSPNLYELRLFGNKLRGSLPKSLGNNSPLKWLDLSNNFFSGELPPTLCDNGMLEELLMAYNSFTGDIPATLGACQSLTRVRLGYNRFTGDVPVGMWGLPHVYLLELIDNSFSGPISKTIAGASNLSQLIISKNNFSGTLPEEIGWLENLVEFSANDNSLTESLPDSIVNLEQLGILNLHNNELSGELPSKIRTWKKLNELNLATNKFTGKIPEDIGSLSVLNFLDLSRNQLSGNIPLSLQNLKLNQLNLSFNRLSGELPPQLSRDMYKNSFLGNSGLCGHVDGFCDGNGQAKEIVYIWLFKAIFFIASFVFVAGVVWFYFKYKNFKMAKRACDKSKSILMSFHKLSFSEREILDCLDEDNVIGRGSAGKVYKVVLGNGEVVAVKKLSGGAKKEIESGGVKKGEVLRDNAFDAEVETLGKIRHKNIVKLWCCCVTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWLTRYKIIVDAADGLSYLHHDCVPPIVHRDVKSSNILLDGEFGARVADFGVAKVIEAAGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKRPVDPEFGEKDLVKWVCTTLDQKGVDHVIDPKLDSCFKKEICKVLNVGLMCTSPLPINRPSMRRIVKLLQEIGGDNLSKSVKKNGKLTPYYYDDASDHDSVA* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02057 1008 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Pte13g02057 1008 SUPERFAMILY RNI-like 80 428 - -
Pte13g02057 1008 SUPERFAMILY L domain-like 379 600 - -
Pte13g02057 1008 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Pte13g02057 1008 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Pte13g02057 1008 FunFam Receptor-like protein kinase HSL1 318 625 - -
Pte13g02057 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 241 977 - -
Pte13g02057 1008 FunFam Receptor-like protein kinase HSL1 677 782 - -
Pte13g02057 1008 Gene3D Ribonuclease Inhibitor 319 624 IPR032675 -
Pte13g02057 1008 Gene3D Transferase(Phosphotransferase) domain 1 783 998 - -
Pte13g02057 1008 Pfam Protein kinase domain 696 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02057 1008 SUPERFAMILY Protein kinase-like (PK-like) 685 975 IPR011009 -
Pte13g02057 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Pte13g02057 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 783 992 - -
Pte13g02057 1008 Pfam Leucine Rich Repeat 223 245 IPR001611 GO:0005515
Pte13g02057 1008 Pfam Leucine Rich Repeat 367 386 IPR001611 GO:0005515
Pte13g02057 1008 Gene3D Phosphorylase Kinase; domain 1 676 782 - -
Pte13g02057 1008 ProSiteProfiles Protein kinase domain profile. 694 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02057 1008 SMART serkin_6 694 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02057 1008 SMART LRR_typ_2 125 147 IPR003591 -
Pte13g02057 1008 SMART LRR_typ_2 293 317 IPR003591 -
Pte13g02057 1008 SMART LRR_typ_2 508 532 IPR003591 -
Pte13g02057 1008 SMART LRR_typ_2 148 171 IPR003591 -
Pte13g02057 1008 SMART LRR_typ_2 100 124 IPR003591 -
Pte13g02057 1008 SMART LRR_typ_2 221 245 IPR003591 -
Pte13g02057 1008 FunFam Leucine-rich receptor-like protein kinase family protein 214 312 - -
Pte13g02057 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 32 196 - -
Pte13g02057 1008 Gene3D Ribonuclease Inhibitor 189 312 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02057 Pte-Chr13 33155597 33159342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02057 28 1009 Receptor kinase-like Gene Family AT1G28440 70.445 0.0 1397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte13g02057 Pkinase 4.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02057 - - qsa:O6P43_031880 1530.77