Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02055 ATGAGGGAAGATGGACCTATTTTAGGAATAGAATTTGATCCATTGCCGCCTGATGCTTTTGGAACTCCTTTAGTTGTAGAACAGCAGCAGCGACCTGGGCTTGCTTATGGCGGGAAGCTATTTGATCGGCTTGATGTGAAGCCAAATAAGACTAGTGGCCAGGCTCTTCAAGAATATCAGTTTTTTCAGAATCCATCCAGCGTTATGCCTGATACATATGGACAAATTGCACCATCCTTACGCGATCCAATAATGGATGGTTCTTCTGCCAGAACTCAATCATTTATGGTCGGTAATGATCTTTTACCAGAGTTCTTACTGTGCAAAGGCCATTCTTCTCGTGATCGTATTTTGTCTCAGCAAAATAAGCAGGGCATTGCCTATTCATCACCCCCACGAGATGACTATCCCGCCCAAAGGGATTCTCTAACAATTACAAACATGGGAATAAATTCGCACTTTAGTGATCACCCAGTTGTTAAATCAGAACCATATGCAGTACCATCGGGTCATTTTTACAATAATGATGCTATGCCTAGGATGGATAGGAAATGGAAGAGTGAGGACACTAGAACTGCAAGAGAAGTAGAAGCCCATGAAATCAGGATGGGAAAGGAGCTTGAGAAGCAAGATATCTTGAGGCGAAAGAATGAAGAAAGAATGAGGAAAGAAATGGAGAGACAAGACCGTGAAAGGCGAAAGGAAGAAGAGAGACTGATGCGTGAAAAACAACGAGAGGAAGAAAGATCAAAAAGAGAGCAGAAACGTGAGATGGAAAGAAGGGAAAAATTTTTGTTGAAGGAACATTTAAGGGCTGAAAAGAAGAGGCAAAAGGAAGAGCTGCGCAAGGAGAAAGAGGCAGAAAGAAGAAAAATTGCTCTCGAGAAGGCAACTGCTCGCAGATTAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAGCTAGAATTAATGGAATTGGCTGCTGCAAGTAAAGGAGTTGCTTCCATCATCCATCTCAATCTTGAGTCATTGCAAAACCTGGAATCTTTCCGGGGTTCTCTGACCTTGTTCCCACCAAGAGGTGTAAAGTTGAAAAAGCCATTTACTATTCAGCCCTGGGTTAACTGTGAGGAGAATATTGGCAATCTTCTCATGGTTTGGAGATTCTTAATTACTTTCACTGATGTTCTGGGATTGTGGCCTTTTACACTTGATGAGTTCATTCAAGCATTTCATGACTATGATTCTAGATTGTTGGGTGAGGTACATGTTGCACTTCTTAAGGTGATAATAAAAGATATTGAGGACATAGCTAGGACGCCTACTGGAATTGGAGCGAATCAGAATGGTTCTGCTAATCCTGGGGGTGGACACCCTGAGATTATTGAAGGGGCTTATGCATGGGGATTTGATATTCGGAATTGGCAGCAGCACTTAAACCCATTAACATGGCCTGAGGTTTTTAGACAACTAGCACTGTCGGCTGGTTTTGGACCAAAGTTAAAAAAACGGAATATTGCATGGCCATATCCTCAAGAAAAAGACGAGGGTCGAGATTGTGAAGCCATAATCTCTACACTTCGCAGTGGTTCAGCAGCTGAAAAAGCTGTGGCAAAAATGCAAGAGAGAGGTCTACTGGCTCCTCGAAGATCAAGGCATCGCTTGACTCCTGGAACTGTAAAATTTGCAGCATTTCATGTTCTGTCGCTCGAGGGGAGCAAAGGATTAACAGTGTTGGAACTTGCTGAAAAGATTCAGAAATCTGGGCTTAGGGACTTGACAACAAGCAAGACGCCAGAGGCATCAATTTCAGTTGCACTGACTAGGGATACTAAGCTTTTTGAAAGAATAGCTCCTTCAACGTACCGTGTAAGAGCTGCATATAGAAAGGATCCTGCTGATACTGAAGCTATTCTTTCAGAAGCCCGAAAGAAAATTCAAATATTTGCAAATGGGGCCCTGCCTGCTGAAGATGTTGATGATGTTGAAAGGGATGAAGAATCTGAAAGTGATGATGAGGATACTGAAGTGGATGAGTTGGTTACTGCTACTGATGAGAATAAAACAACCGAACAATATGAAGATATGAACCCTTGCTCAAGCGATGGAAAAGAAAATTTAAGCAATGAAATCAAACTAAATCTTCAAAATGAGTTTGATAAAGTGACTTCATTTGCTGAGAATGGCACCAAAATTGTTGATTGTCAAGATGAAATTATCGAGCCACCTGTTGTTGAAGATGTCCATAAAGATAACATCGATCAGAATGACCTGGAAATTGATGAGAGCAAGTCTGGGGAGTCATGGATTCAAGGGCTGACAGAAGGGGATTATCCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTGGCTTTGGTTGGTGTTGCAAATGAAGGAAACTCAATCCGTGTGGTTCTTGAGGACCGACTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCTGAGGCACAGTTAGATAAAAAATGCACCAAAGATGATATTGTAAATAAATCAGATGTTCCACTCTTTGTTGGGAATAGAGTGGAAACACAGTACAATTATCCTGTTATGGAAGGAAGCCAAAGCCCACTGCCTGATTTCAACAATAAAACTAATGAGGAATCTCCAAGCGCCATTGAAAACCAAAAATTGCTCTCAACTCCACAAAATGGTCAGAATCAACTTAGTAGCACACCTAGTGAAAATCCCTCAGTTCCAGACATAAATATTGGTTCAGATAATTTCCAAATACAGCAACTTGAATATGCTTCTAAAAGGTCTCGTTCACAACTGAAATCATATATTGCTCAGAGAGCAGAAGAGATGTACATATACAGGTCATTGCCCCTTGGCCAAGACCGAAGACGCAATCGCTATTGGCAGTTTGTTGCTTCTGCTTCAAGGAATGATCCTGGTGCTGGTAGGATATTCGTTGAATTGCATGATGGTAACTGGAGGCTTATTGATTCAGAAGAAGCCTTTGATGCTCTTTTAATGTCTCTGGACGCACGTGGGATAAGAGAATCTCATTTGCGCTTGATGTTGCAGAACATTGAGTGTACCTTCAAAGAAAATGTTAGAAACAGCTCAGAAAGTTCTAAGCTTTTTGCGACAGAAGAGGCATCTGTCAAAAATGAAGCTGATGAGATGGATTGTAGTCCTGATCCCTTTGTTAATTTTGGCAGTCCTAGCAGCACTCTCTGTGGTTCAAGTTCTGATGCACTGGAATCATCTTCATCTTTCAAAATTAAGATAGGTAGATACAATACAGAAAAGAAAACTTCCATTCGGAGGTACCAAGAATTTCAGAGATGGATGTGGAAAGAATGCTATAATGCATCATCCTTATATGCAATGAGATACGGAAAGAAGAGAGGCAGACCACTGGTGGACATTTGTGGTGTCTGTTTGAATTCTTATTACTTTGAAAGTTATCATTGCCTTTCTTGTCATCAGACTACCTCAATTACTGTATTCAATTCCTCCCGACATTCTTGTCAATGTGGAGAGAAACCAGACACTCGTGATATCTGTGTTTCGGACGCTTCTCTTCCTCTGCAAATTAGATTAGTACAATCCATAATGGCCAACATTGAGGTATCTATTCCACCTGAAGCTTTATGTTCTCTTTGGAAGGAAGACTACAGAAAACATTGGGGTAAAAAGTTATGCAAGTCATCTTCAGCCGAGGAACTTCTAAAGATGTTGACTCTACTTGAAAGAGCATTACGAAGAGAATCTTTTTCTCCAAACTTTTGTACAACAGAAGAATTATTGGGGTCAACTAATATGTCAGTGTCTGCCGTAGAAGGTTCCACGGATCTTGAATCTGTTCCTGTTCTTCCATGGTTGCCGCAAACCACTGCAGCTGTGGCTCTGAGGTTGCTAGAGTTTGATGCTTCCATCAGCTATGCTCTGCGTGAAAAATGTGAGCCTTATGAGACCACGGAAGCAAAAGAATACATAGAACTGCCTTCAAGATATGCTCCCACAAAAACTGCAACAGACACAGAGCCAGCATATATACATGATGAGTACAAACGAGAAGATATTAGACCTGAATTCAAGAGTGGAAGAAACATCCGTAAAAGAGGACATTATGAACAAGGACGAGGTAAAAAGCACTCTAAGAAAATACAGGACTCCAAACGTGATATCAGCCTTCGAAATGTGAAAGGTAATGACAATTACAATCAAGGACTCAAACAGCAAGTGCGAGGAATAAATGGTCAGTCTGGTGGACGAGGTCGCCGGACAGTTAGGAAAAGGAGGGTGGAGAAGAGGGCCGTTGAGGACTTATTACTAGGACAAACAACTGCGACCCAAGTCTCCAAGCCTCAAGCAGAACCGACGGGAAGCTTAGTCGAGGAATGGGATGGTGATAGGGCAGTAAGTACCCCAATTGAACTTGGTGACAATTGCAACAGTGCTGAAGAAGTTGAATCCGATGACAATGGTCAAGCTGTGGAATATGAGCAAGGAAACTGGGAGATAGGTTTCAGTGGTGCCTCCAGCAGATGGTGTGGGGGATTAATGGAAGCGAGTGGGGAAGATGTGGATGCTTCCGAAGATGACAATGGTATTGAAGATGGGGTGGAGGAGGATTATGTGGCTGATGGGATGAGCGAGGATTCGGATGAAATGGCCACCAGGGGTGATGACGATGGCTCAGAATCTGCAATGTCTGAAGATTCTTGTGATTAA 4692 0.4216 MREDGPILGIEFDPLPPDAFGTPLVVEQQQRPGLAYGGKLFDRLDVKPNKTSGQALQEYQFFQNPSSVMPDTYGQIAPSLRDPIMDGSSARTQSFMVGNDLLPEFLLCKGHSSRDRILSQQNKQGIAYSSPPRDDYPAQRDSLTITNMGINSHFSDHPVVKSEPYAVPSGHFYNNDAMPRMDRKWKSEDTRTAREVEAHEIRMGKELEKQDILRRKNEERMRKEMERQDRERRKEEERLMREKQREEERSKREQKREMERREKFLLKEHLRAEKKRQKEELRKEKEAERRKIALEKATARRLAKESMELIEDEQLELMELAAASKGVASIIHLNLESLQNLESFRGSLTLFPPRGVKLKKPFTIQPWVNCEENIGNLLMVWRFLITFTDVLGLWPFTLDEFIQAFHDYDSRLLGEVHVALLKVIIKDIEDIARTPTGIGANQNGSANPGGGHPEIIEGAYAWGFDIRNWQQHLNPLTWPEVFRQLALSAGFGPKLKKRNIAWPYPQEKDEGRDCEAIISTLRSGSAAEKAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRAAYRKDPADTEAILSEARKKIQIFANGALPAEDVDDVERDEESESDDEDTEVDELVTATDENKTTEQYEDMNPCSSDGKENLSNEIKLNLQNEFDKVTSFAENGTKIVDCQDEIIEPPVVEDVHKDNIDQNDLEIDESKSGESWIQGLTEGDYPDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQLDKKCTKDDIVNKSDVPLFVGNRVETQYNYPVMEGSQSPLPDFNNKTNEESPSAIENQKLLSTPQNGQNQLSSTPSENPSVPDINIGSDNFQIQQLEYASKRSRSQLKSYIAQRAEEMYIYRSLPLGQDRRRNRYWQFVASASRNDPGAGRIFVELHDGNWRLIDSEEAFDALLMSLDARGIRESHLRLMLQNIECTFKENVRNSSESSKLFATEEASVKNEADEMDCSPDPFVNFGSPSSTLCGSSSDALESSSSFKIKIGRYNTEKKTSIRRYQEFQRWMWKECYNASSLYAMRYGKKRGRPLVDICGVCLNSYYFESYHCLSCHQTTSITVFNSSRHSCQCGEKPDTRDICVSDASLPLQIRLVQSIMANIEVSIPPEALCSLWKEDYRKHWGKKLCKSSSAEELLKMLTLLERALRRESFSPNFCTTEELLGSTNMSVSAVEGSTDLESVPVLPWLPQTTAAVALRLLEFDASISYALREKCEPYETTEAKEYIELPSRYAPTKTATDTEPAYIHDEYKREDIRPEFKSGRNIRKRGHYEQGRGKKHSKKIQDSKRDISLRNVKGNDNYNQGLKQQVRGINGQSGGRGRRTVRKRRVEKRAVEDLLLGQTTATQVSKPQAEPTGSLVEEWDGDRAVSTPIELGDNCNSAEEVESDDNGQAVEYEQGNWEIGFSGASSRWCGGLMEASGEDVDASEDDNGIEDGVEEDYVADGMSEDSDEMATRGDDDGSESAMSEDSCD* 1564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02055 1563 ProSiteProfiles DDT domain profile. 371 430 IPR018501 -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 1505 1563 - -
Pte13g02055 1563 Pfam DDT domain 372 427 IPR018501 -
Pte13g02055 1563 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 942 1014 IPR028941 -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 208 260 - -
Pte13g02055 1563 Coils Coil 213 298 - -
Pte13g02055 1563 ProSiteProfiles HARE-type HTH domain profile. 552 621 IPR007759 GO:0006355
Pte13g02055 1563 MobiDBLite consensus disorder prediction 1387 1406 - -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 1431 1445 - -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 1356 1457 - -
Pte13g02055 1563 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 759 802 IPR028942 -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 1513 1538 - -
Pte13g02055 1563 Pfam HB1, ASXL, restriction endonuclease HTH domain 552 620 IPR007759 GO:0006355
Pte13g02055 1563 MobiDBLite consensus disorder prediction 852 906 - -
Pte13g02055 1563 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1561 IPR044977 GO:0006357
Pte13g02055 1563 MobiDBLite consensus disorder prediction 183 202 - -
Pte13g02055 1563 SMART testlast3 371 430 IPR018501 -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 650 672 - -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 1540 1554 - -
Pte13g02055 1563 MobiDBLite consensus disorder prediction 653 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02055 Pte-Chr13 33137228 33147204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02055 1 1491 Homeobox Transcription Factor Family AT1G28420 48.696 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pte13g02055 WSD 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02055 - - qsa:O6P43_031877 1815.43