Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02043 ATGGACAAAAGCAAAGATGAGGGGAAAAGGGAGTACAGGGATGAAGAAGGTGATGAAGATGAAGATGATGCTTTCAGTGACCTGGGGTTGTCGGAGGATGAAAGAAAGAGGAGAGTGATCATGACAGACCAACTGATCCACAGTAAGAAGGGAGGGTCTGGAGGTGGAGGTTGTTCAGCAGCACGTCCTACTTGTCAAGTTGACTACTGTAATGCTGATCTAACTGATGTCAAGCCCTATCACAAGCGTCACAAGGTGTGTGAGCCTCATGCCAAAGCTTCTTCTGTCTCCATTGCAGGCCTGCAACAACGCTTTTGCCAGCAATGTAGCAGATTTCACGATCTAACAGAGTTCGATGAGAACAAAAGGAGCTGCAGAAGGCGTTTGGCCGGACATAACGAACGCCGGAGGAAAAATTCGACATCTGATTATCATGGAGAATGCCAACGGTGA 453 0.4768 MDKSKDEGKREYRDEEGDEDEDDAFSDLGLSEDERKRRVIMTDQLIHSKKGGSGGGGCSAARPTCQVDYCNADLTDVKPYHKRHKVCEPHAKASSVSIAGLQQRFCQQCSRFHDLTEFDENKRSCRRRLAGHNERRRKNSTSDYHGECQR* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02043 150 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 35 140 IPR044817 GO:0003677
Pte13g02043 150 MobiDBLite consensus disorder prediction 1 37 - -
Pte13g02043 150 FunFam Squamosa promoter-binding-like protein 14 57 126 - -
Pte13g02043 150 SUPERFAMILY SBT domain 63 143 IPR036893 GO:0003677|GO:0005634
Pte13g02043 150 Pfam SBP domain 65 138 IPR004333 GO:0003677
Pte13g02043 150 MobiDBLite consensus disorder prediction 130 150 - -
Pte13g02043 150 Gene3D - 56 126 IPR036893 GO:0003677|GO:0005634
Pte13g02043 150 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Pte13g02043 150 MobiDBLite consensus disorder prediction 13 28 - -
Pte13g02043 150 PIRSF SBP 1 150 IPR017238 GO:0003677|GO:0003700|GO:0009908
Pte13g02043 150 MobiDBLite consensus disorder prediction 135 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02043 Pte-Chr13 33045721 33047202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02043 65 147 SBP-box Gene Family AT1G53160 74.699 5.43e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte13g02043 SBP 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02043 - - zju:107425063 160.999