LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g02006	ATGGGAAATCCTCCGGTTGCCGGATCAGACTTCCACTACGTTACCTCAGCGTTGTCCCAGAGTGCTTGGTACCTCGCCTCCCTTCTGTTATACATTGGGAGCCCTAGTCGCCCCGCTGACCTCGCCTCTCGTTGCTCCTTGTTTAAAGCATCCGCTGAGTTTGTGGAGTTTCTATGCTCAATTCCCAACTCACCAATCTACTTGACGCATGATCTCTACGTCACGCTTTCTCCCATGACTATAATTGTTCTTCTGTCATTTTTGTTAAAGACAGAGACGACTCGTTTCTTTATCCAGCCCAAAATTGACTCGCGAAAATTGACATTTTCTGGTGATTCCAGTGGTTTTAGGACGTACCTAAGGAAGAGAAAGAGAATTTGTTTATCGCACAATGACATTTTTCCTGTTGCAAAAAGGGCCATGATACTGGACTCTGAACATGTGGAAATGGTGGATCAAGTAGTGTTGACTTCACAATCAACTTCTCCAATGATAACTGACAACTGGATGATAAGTAAGTGTTGTCACCAGGAAGGCAGTTTATCAGCAGAAGAGGATGCCAACTACAGTTGTTGTATTCACGGTCCTTTGAATGTGCTAATGGTTCAAGAAAAAGGAAATTCAGAAGGCAAGAAGATTCAGTCTTTGAGCAGTTCTGAGAGCAAGAATGCAGCCACGAATAGTCTCACACTATTTAACAATGATATATATTTAGATGTAACGCCGAAGAGTAACATGCGAAGAACTGACGAGAATAATGATGCTGAGCAGCAAAATCACTCTGGCACTCAAGATCTGTTACTAAATGTTGGGAAAGACACGGTAACTCAAAGTCTACGGGCTTCCTCTAGGATTTCAGAATATGATAAGAATATGGTACTTCCTGTTGAGAAACAGCAACGTAAAAGGGGACACCCTGATTACAGTGGGATTCATATTAACAAAAATAAAGGGAAGTCTTTCGCATTGCACCCTAAGGATTCAGGAAAGTCAAAAGTGCTTCCAAACTTTGATTCTTACATAGTTGAAGCAGAAGAAGGTTCAGGAGGATATGGTACTGTTTATAGGGCACGGAAGAAGAGTGATGGAGCTATAGTTGCTATCAAGTGCCCTCATGCTAGAGCTCGTGGTCAACATGTTGTTAACGAGTTAAAAATGTTGGAACGTTTTGGAGGTCAAAATTTCATAATTAACTACGAAGGCTGCTTCAAGAATGGTGAGTCTGATTGTCTTGTTCTTGAACATATTCAGCACGATAGACCTGAGGCGCTAAGAAGAGAAATTGAGGTGGGTGAGCTCCGATGGTATGGTTATTGCATGTTCAGAGCTCTCGATGCCCTTCATAAGCAGGGGGTAGTCCATAGGGACGTTAAACCTGGCAATTTCCTTTTCTCTCGTACAGCTAAGAAAGGTTATCTGATTGATTTTAATCTCGCCTTGGATCTGTACCGGAAATTTGGAAATACTGGCAAATCAAGGCGGGAATGTGGTCCAAGCGTTCATCTTGTTAGAGTTCCAATCTCCCCAACCAAAAATCGGACACCACCCAATAAGATATTCTCAAGATCGAAGTCCAAACCTACTGTAGATCATAATAAATTGGAAAGGAACTCTCGAAGTCAAACTAGGGGAAACAGTAACTTAAGTTCATGGAATGTCATTCAATCTCAAGGTGCAGATGTCTCTGGCATTACTTCGGGGAAAGAAGTGACAAGCACCAAGAACTCATCTGCTGAAAGACTGAAGGAACCTTTACCCTGCCGAGGTAGAAAGGAGCTCCTCAACCTTTTACAGGAAGCAATGAAAAGTCCTAAGCAAGGAGCATCAAGTGTTCCAGCTCCCATGCGGAAGCGTGTGGCTGCCCCTTGTGGAGAGGTGGGGAACAAGCTGATTTACATTACTCCTATGCCTCTGCACTCAGAGAGTTTTAGAACTGCTGGAGCTGGCTTAATGAAAAAGAAAGGGGATGGAAAACAGATAAGAGAGGGTCCTTGTGTTGGGACGAAAGGCTTCCGTGCTCCAGAGGTTTTGTTTAAATCTGCTCATCAAGGTCCTAAAATTGATATATGGTCTGCTGGAGTCACCTTACTCTACCTCATGATTGGGAGAACACCTTTCACTGGTGATCCAGAGCAGAACATAACGGAGATAGCAAAACTGAGAGGCAGTGAAGATCTGTGGGAGGTTGCCAAGCTACATAATTGTGAATCGTCGTTCCCATTGGAATTGTATCATGTACGTTCTTCATCATATCTTAGCCTTCGTGATTGGTGCATAAAAAACACCAGGAGACCAGAATTCATCCATGCGATCCCCGAAACTCTCTATGATATCGTAGACAAGTGCTTGAAGGTAAATCCCAGGCTAAGGATCAGTGCAGAAGAAGCTCTTCGGCATGAGTTTTTTCTGCCGTGTCATGAAAGTGTCAAAAAGCTGCCGTTGTCTGTGAAAGAATACGGTTTCAACTCTGCATTGAGCAATTTGTCTCTACTGGAAAAGGAATGCTTTGCCTCTGCCATGCAGACGTTATGA	2532	0.4336	MGNPPVAGSDFHYVTSALSQSAWYLASLLLYIGSPSRPADLASRCSLFKASAEFVEFLCSIPNSPIYLTHDLYVTLSPMTIIVLLSFLLKTETTRFFIQPKIDSRKLTFSGDSSGFRTYLRKRKRICLSHNDIFPVAKRAMILDSEHVEMVDQVVLTSQSTSPMITDNWMISKCCHQEGSLSAEEDANYSCCIHGPLNVLMVQEKGNSEGKKIQSLSSSESKNAATNSLTLFNNDIYLDVTPKSNMRRTDENNDAEQQNHSGTQDLLLNVGKDTVTQSLRASSRISEYDKNMVLPVEKQQRKRGHPDYSGIHINKNKGKSFALHPKDSGKSKVLPNFDSYIVEAEEGSGGYGTVYRARKKSDGAIVAIKCPHARARGQHVVNELKMLERFGGQNFIINYEGCFKNGESDCLVLEHIQHDRPEALRREIEVGELRWYGYCMFRALDALHKQGVVHRDVKPGNFLFSRTAKKGYLIDFNLALDLYRKFGNTGKSRRECGPSVHLVRVPISPTKNRTPPNKIFSRSKSKPTVDHNKLERNSRSQTRGNSNLSSWNVIQSQGADVSGITSGKEVTSTKNSSAERLKEPLPCRGRKELLNLLQEAMKSPKQGASSVPAPMRKRVAAPCGEVGNKLIYITPMPLHSESFRTAGAGLMKKKGDGKQIREGPCVGTKGFRAPEVLFKSAHQGPKIDIWSAGVTLLYLMIGRTPFTGDPEQNITEIAKLRGSEDLWEVAKLHNCESSFPLELYHVRSSSYLSLRDWCIKNTRRPEFIHAIPETLYDIVDKCLKVNPRLRISAEEALRHEFFLPCHESVKKLPLSVKEYGFNSALSNLSLLEKECFASAMQTL*	844

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g02006	843	Gene3D	Transferase(Phosphotransferase) domain 1	418	558	-	-
	Pte13g02006	843	MobiDBLite	consensus disorder prediction	506	581	-	-
	Pte13g02006	843	ProSiteProfiles	Protein kinase domain profile.	340	802	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g02006	843	FunFam	Probable serine/threonine-protein kinase DDB_G0291918	332	496	-	-
	Pte13g02006	843	Gene3D	Transferase(Phosphotransferase) domain 1	639	822	-	-
	Pte13g02006	843	Gene3D	Phosphorylase Kinase; domain 1	332	415	-	-
	Pte13g02006	843	MobiDBLite	consensus disorder prediction	524	538	-	-
	Pte13g02006	843	MobiDBLite	consensus disorder prediction	539	579	-	-
	Pte13g02006	843	SMART	serkin_6	340	802	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g02006	843	MobiDBLite	consensus disorder prediction	245	264	-	-
	Pte13g02006	843	Pfam	Protein kinase domain	665	802	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g02006	843	Pfam	Protein kinase domain	346	484	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte13g02006	843	SUPERFAMILY	Protein kinase-like (PK-like)	332	806	IPR011009	-
	Pte13g02006	843	FunFam	Kinase like protein	640	813	-	-
	Pte13g02006	843	PANTHER	OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED	283	810	-	-
	Pte13g02006	843	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	452	464	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte13g02006	Pte-Chr13	32769717	32775206	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g02006	313	465	Core Cell Cycle Gene Families	AT4G28980	30.488	1.50e-14	75.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-2	Pte13g02006		Pkinase	1.4e-18	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g02006	K02214		-	cave:132175423	751.895