Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g02004 ATGCTTGTGGGAATGCTTCCTGTATTTCTGTTCATTCTTGCACCAGCATTTTGTAGTGGAGACACCAACCTTCGAGATGTTGCAGCAATCAATGATTTATATGGTGCTTTGGGTTTTCCACCTCTTCAAGGGTGGGTACAATTAGGCGGAGACCCTTGTTTGGAGAAGTGGCAAGGTGTTGATTGTGTCTTCTCCAATATGACTGCTATACGACTGAGTGGAATGAATTTGGGGGGCGGACTGGGCAGTAGCTTGGACTTCCAATCAATAATAGAAATAGACTTAAGTAACAACCATATTGGTGGAACTATACCTTCCATTTTGCCTCCAACTATCAGAAATTTGTCACTAAATAATAACACGCTAAATGGGTTGATACCTGATTCCTTCATGATGCTCGGTGCTCTAACCAATATGGATCTCTCAGGAAACAACTTGACTGGTCAGCTACCTCCATCAATGGGAAATCTGTCATCTCTTACCTCATTAAACCTACAAAACAACAAACTTACTGGAACTCTTGATGTTATACAAGATCTTGCACTTCAGGATCTGAATGTGGAGAACAATCTATTTTCAGGCCCTATTCCTCCAAAGCTACTGACAGTTCCTAATTTCAGGAAAGATGGAAATCCATTTAACACTACTATTCTTCCCTCACCACCGGCTGCGTCTCCTGCACCTTCTGTTATTCTGCCACCTTCAAAAGAATCACCACACAAACAGGCATATGAACCTTCTGCTTCCAAAGAGCCAACATCTACAAGCTCAAGGAAATCTTCAGCTGCTAACCAGATTGTTTTAATTGCTTCAGTAGCAGTTTTGATATTTATTGCATTATCATTGTGTTGTCTTATGCGGAGGTGCTTCAGCAGAAGGCCAAGCAGCAGAAATACTGGAAATCATGTAGTTAATGTCTCTACTGAACCTCCTAAGAAACCTTTTGAGGCTGCAAATCAAATGGAGAGAGCTCCCAAGGAAACTGCAGAGCCATTGCATGCACATAGAGAGCAACATCAAACATCAAATTTGAACTTAAAGGCACAGAATGAAAAGTTAAATGAGAAAGGAGCACTGACAAGTAATGAGTACAAGAAAGACTCTCTATTGGAGAGTTCTAAGGTCGATTCGATTTTTTTGCATTCACAACCACCTATGCCACTCTTTCCTGATGGGAGGTCTGGTGTTGCTGTACTTACTGAGAAAATATCAGGAAGGAAACTATCAGAATCTTCAATTTCAGCTTCTGTAAATCTTTATACTATCGCACTACTCCAGCAGTATTCGGACAACTTCTCTGAAGAAAATTTTGTTGGAAAAGGCATACTTGGCAGTGTTTATAGAGCTCAGCTTCCTAATGGACAGTTATTAGCGATCAAGAAACTGGATAATACTCCTTTTTGGGGGAAGAGTCAAGATGAGTTTCTTGAACTAGTGTCCAAAATCTCTAGCATTATGCAAACACATATTTTGAAACTTGAAGGCTATTGTGCCGAGCATGGCCAACATATACTTGTGTATGAGTATTGCAGTAATGGATCACTTCATGATGCACTTCATGTGAATTATGAGATCCATAAGAAGCTTTCATGGGATGCACGTGTCCGGGTGGCACTTGAAGCTGCACAAGCCTTAAAGTACTTGCATGAGGACTTTCAACCACCCATTGTGCACAGAAATTTCAAGTCTTCTAATATTCTTCTTAACAAGCAGCTCGCAGTCCGAGTGTCAGACTGTGGGTTTGCATCATTGCTTGCATCTAGCTCAGTGGGTCAGTTGTCGGGACGACTCCTCACAGAAAATGGTTACAGTGCACCAGAATTTGAGACTGGTAGTTATTCACACCAAAGTGATGTTTATAGTTTTGGAGTTGTAATGCTAGAACTCCTCACAGGGCGGAAGTCCTATGACAGGTCCCGACCTCGTGGAGAGCAATTTCTCGTTAGATGGGCAGTTCCTCAACTTCATGACATAGATGCACTGTCAAGAATGGTTGATCCCTCACTAAATGGAGTATATTCTATGAAGTCATTGTCACGCTTTGCAGATATTATATCTTCATGTTTACAGCATGAACCAGAATTTCGACCCGCTATGTGTGAAGTTATCCAGGACCTTTTGAGGATGATTTAG 2133 0.414 MLVGMLPVFLFILAPAFCSGDTNLRDVAAINDLYGALGFPPLQGWVQLGGDPCLEKWQGVDCVFSNMTAIRLSGMNLGGGLGSSLDFQSIIEIDLSNNHIGGTIPSILPPTIRNLSLNNNTLNGLIPDSFMMLGALTNMDLSGNNLTGQLPPSMGNLSSLTSLNLQNNKLTGTLDVIQDLALQDLNVENNLFSGPIPPKLLTVPNFRKDGNPFNTTILPSPPAASPAPSVILPPSKESPHKQAYEPSASKEPTSTSSRKSSAANQIVLIASVAVLIFIALSLCCLMRRCFSRRPSSRNTGNHVVNVSTEPPKKPFEAANQMERAPKETAEPLHAHREQHQTSNLNLKAQNEKLNEKGALTSNEYKKDSLLESSKVDSIFLHSQPPMPLFPDGRSGVAVLTEKISGRKLSESSISASVNLYTIALLQQYSDNFSEENFVGKGILGSVYRAQLPNGQLLAIKKLDNTPFWGKSQDEFLELVSKISSIMQTHILKLEGYCAEHGQHILVYEYCSNGSLHDALHVNYEIHKKLSWDARVRVALEAAQALKYLHEDFQPPIVHRNFKSSNILLNKQLAVRVSDCGFASLLASSSVGQLSGRLLTENGYSAPEFETGSYSHQSDVYSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAVPQLHDIDALSRMVDPSLNGVYSMKSLSRFADIISSCLQHEPEFRPAMCEVIQDLLRMI* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g02004 710 MobiDBLite consensus disorder prediction 294 313 - -
Pte13g02004 710 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 708 IPR046959 -
Pte13g02004 710 Gene3D Phosphorylase Kinase; domain 1 395 509 - -
Pte13g02004 710 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 112 224 - -
Pte13g02004 710 Coils Coil 336 356 - -
Pte13g02004 710 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 510 710 - -
Pte13g02004 710 SUPERFAMILY L domain-like 25 203 - -
Pte13g02004 710 SUPERFAMILY Protein kinase-like (PK-like) 410 706 IPR011009 -
Pte13g02004 710 ProSiteProfiles Protein kinase domain profile. 432 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g02004 710 MobiDBLite consensus disorder prediction 219 233 - -
Pte13g02004 710 Pfam Protein tyrosine and serine/threonine kinase 436 706 IPR001245 GO:0004672|GO:0006468
Pte13g02004 710 Gene3D Ribonuclease Inhibitor 29 222 IPR032675 -
Pte13g02004 710 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 399 509 - -
Pte13g02004 710 MobiDBLite consensus disorder prediction 212 260 - -
Pte13g02004 710 Gene3D Transferase(Phosphotransferase) domain 1 510 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g02004 Pte-Chr13 32717888 32723953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g02004 12 710 Strubbelig Receptor Gene Family AT4G03390 47.688 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte13g02004 PK_Tyr_Ser-Thr 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g02004 - - gmx:100793423 759.214