Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01990 ATGCATAGAAGGTATATGGAAACATCCAACAGTTTGGCCAGAGAGAAGAGACGTTTAGATTCAGCTGAAGAAGCTCAGCCTGAAAGGAAACGGCCTGCTTTAGCTAGTGTTATTGTTGAAGCTCTCCAGGTAGACAGCCTGCAGAAACTTTGCTCATCTCTAGAGCCGGTTCTTCGCAGAGTTGTTAGCGAAGAAGTTGAGCGTGCTTTAGCAAAAATAGCACCAGCAAAACTTACTGGGAGGTCATCCCCTAAACGCATAGCAGGTCTTGATGGAAGAAATCTACAGCTGCATTTCAAAACCAGGTTGTCGCTTCCTCTTTTCACCGGTGGAAAAGTGGAAGGTGAGCAAGGGGCAGCAATACATATCATTCTAATCGATGCGAACTCAGGCTGCATTGTCACCTCTGGTCCTGAGTCTTCAATCAAACTAGATGTGGTTGTGCTTGAAGGGGATTTCAATAACGAGGATGATGATAACTGGACCCTAGAAGAATTTGAGTCTCATGTTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTTACGGGGGATTTACAAGTTTCAATGAAGGAGGGTGTGGGAACTCTAGGGGAACTGACATTTACTGACAACTCGAGCTGGATAAGGAGTCGGAAATTCAGACTAGGGCTGGAAGTGGCATCGGGTTATTGTGAGGGAATGCGCATCCGTGAAGCCAAGACAGAGGCCTTTACTGTTAAGGATCACCGGGGAGAATTATACAAGAAACACTATCCGCCGGCCTTAACCGATGAGGTATGGAGATTGGAAAAAATTGGCAAGGATGGCTCATTTCACAAGCGGCTCAACAAACATGGAATATTTACAGTTGAAGATTTCCTAAGATTTGTGGTTAGAGATTCTCAGAGATTGCGTAATATTCTTGGAAGTGGTATGTCCAATAAAATGTGGGATGCTCTTGTTGAGCATGCGAAAACTTGTGTTTTGAGTGGGACACTTTACGTATACTATTCCGATGATTCAAGGAATATTGGAATTGTTTTCAACAATATCTATGAGTTAAGTGGATTAATCGCCAATGGCCAATATTATTCAGCTGATTCTCTTTCTGACTGTCAAAAGGTTTTTGTTGATAGCTTGGTGAAGAAAGCTTATGAAAATTGGATGGATGTGATAGAGTATGATGGGAAATCTCTCTTGAGTTATAACCAGAACAAGAGCTTGCCTTCTTCTCAACCTGAGGTTCCAACTAGCACTCAGAGTTATTCAAACACTTATGAGCAGCAATTCAACCTACCGACCTTGCCCGTACCAGGTCCACCAGAACAATCATGCATGGATTCAGGTCCAATAGTTGGAGGTGAGTATTTCTTGGTAAGAAGTTTTTACATTGGCAGTCAAGAAGTGGTTGGTTAA 1395 0.4308 MHRRYMETSNSLAREKRRLDSAEEAQPERKRPALASVIVEALQVDSLQKLCSSLEPVLRRVVSEEVERALAKIAPAKLTGRSSPKRIAGLDGRNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIILIDANSGCIVTSGPESSIKLDVVVLEGDFNNEDDDNWTLEEFESHVVKEREGKRPLLTGDLQVSMKEGVGTLGELTFTDNSSWIRSRKFRLGLEVASGYCEGMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKHGIFTVEDFLRFVVRDSQRLRNILGSGMSNKMWDALVEHAKTCVLSGTLYVYYSDDSRNIGIVFNNIYELSGLIANGQYYSADSLSDCQKVFVDSLVKKAYENWMDVIEYDGKSLLSYNQNKSLPSSQPEVPTSTQSYSNTYEQQFNLPTLPVPGPPEQSCMDSGPIVGGEYFLVRSFYIGSQEVVG* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01990 464 Pfam Calmodulin binding protein central domain 255 320 IPR046830 -
Pte13g01990 464 Coils Coil 5 25 - -
Pte13g01990 464 MobiDBLite consensus disorder prediction 1 30 - -
Pte13g01990 464 Pfam Calmodulin binding protein C-terminal domain 326 387 IPR046829 -
Pte13g01990 464 PANTHER OS02G0177800 PROTEIN 15 426 IPR012416 GO:0005516
Pte13g01990 464 Pfam Calmodulin binding protein-like N-terminal domain 95 242 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01990 Pte-Chr13 32599288 32602350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01990 16 432 Calmodulin-binding Proteins AT4G25800 74.702 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01990 - - zju:107423105 749.199