Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01985 ATGGTAAAGATGGAATATGAAGGTGACGGAGAAGCAAATTCAGAGCAATACCAACCACAAACCTCCTCCAGAAACTGTACCCTCCGAGAAGCCATTGATTTCATAGCTTCTTTGATTTCACTCTCCCATTCAATCAGAGTTTTTGCTGCAAAATGGCAACTGATAAGGAGAAAGCTGGAAGAGCTTCATTCCGGGTTAATCGCAGCTGAGAGCAGTGTTTCTGGGGAGAACCCATCGCTTTCTGCTTTAGTCCCTGCCATATTGTTCACTGAGAACGAGTGCTATGATCTTGCTCGGCGCTGTGTTGATGTTTCATACAGTGGGAAGCTTCTGATGCAAAGCGATTTGGATGTGATCTGCTCGAAATTCGATCTCCATCTCAGAAAGCTATCAGAGATATACACGGCTGGTATATTGACTCATGATTTTGCACTTGTTGTTTCCAGGCCTAGTCTTGGTGCCTGTAAAGATGACGTGAGATTTTACATTAGAGATTTATTAACAAGGATGAAGATTGGTGATTTTTATATGAAAAGGCAGGCTTTGGCTAATCTTCATGAGGTTGTGGTTGAAGATGAGAAGTATGTGAAGGTTATTATCGAAGTGAGTGACATTGTCAATGTGTTGGTCAACTTTCTTGGTTCCTCAGAGATAGAAATCCAAGAAGAGTCAGCCAAAGTGGTGTCTGTGATTGCAGGGTTTGATTGTTACAAAGGGTTGTTGATTGCTGCTGGCATTATCGCACCTTTGATACGAGTCTTGGAATGTGGGAGTGCATTGGGGAAAGAAGGAGCTGCAAGGTGTTTGCAGAAATTGACTGAGAATTCAGAAAATGCATGGTCGGTTTCAGCTCACGGTGGTGTGACATCTTTGCTGAATATATGTACTGTTGATGATTCTAAGGGTGAATTGCTTGCTTCAGTTTGTTGGGTTTTGAGAAATCTTGTCAGTGTTGAAGAAATAAAGAGATTTATGGTCGATGAAGGTGCGATTTCCACGTTTGTTAAGCTTTTGAAATCAAAGGATGAAATAGTTCTGGTAAATTCAGTTGAGTTTATTCAGCAGATTGCCTCGGGGGATGAATCTGTTAAGCAAATAGTGATAAGAGAAGGTGGGGTTCGAGCATTCCTACGTATATTGGATCCCAAATGGTCATATTCTTCGAAAACAAGAGAGATTTCAATGAGGGCGATCGAGAATATCTGCTTTTCATCAAGTAGTTCCATAAATATATTGATGAACTATGGATTTGTGGATCAACTTCTACATTACATTCGCAATGGTGAGGTTTCAGTTCAAGAGTTGGCACTCAAAGTTGCATTCAGGCTTTGTGGAACATCAGAAGAGGCAAAGAGAACAATGGGAGATGCTGGATTCATGACAGAGATCATCAAGTTTTTTAATGCTAAATCATTTGAAGTTCGTCAAATGGCTGCTGAGCTACTATATAGTATGGTCTTAGTGCCTAAACATAGAAAGAAATTTGTCCAGGATGATAGAAATATTGGTCTGCTTCTGCAATCACTTGATTCAGAAGAAGGTAATTCAGGTAACAATAAAGTTTTGATAACTATATTAATGTCATTAACAAATTGCAACAGTGGAAGGAAAAAGATTGTAAATTCTGGGTACCTGAAAAGCATAGAAAAACTTGCAGAAGCTGAAGTTTCTGATGCTAAAAGACTTGTCAGGAAGTTATCCGCAAACAGATTCCGTAGCATGTTAAGTGGAATCTGGCATTCATGA 1746 0.3986 MVKMEYEGDGEANSEQYQPQTSSRNCTLREAIDFIASLISLSHSIRVFAAKWQLIRRKLEELHSGLIAAESSVSGENPSLSALVPAILFTENECYDLARRCVDVSYSGKLLMQSDLDVICSKFDLHLRKLSEIYTAGILTHDFALVVSRPSLGACKDDVRFYIRDLLTRMKIGDFYMKRQALANLHEVVVEDEKYVKVIIEVSDIVNVLVNFLGSSEIEIQEESAKVVSVIAGFDCYKGLLIAAGIIAPLIRVLECGSALGKEGAARCLQKLTENSENAWSVSAHGGVTSLLNICTVDDSKGELLASVCWVLRNLVSVEEIKRFMVDEGAISTFVKLLKSKDEIVLVNSVEFIQQIASGDESVKQIVIREGGVRAFLRILDPKWSYSSKTREISMRAIENICFSSSSSINILMNYGFVDQLLHYIRNGEVSVQELALKVAFRLCGTSEEAKRTMGDAGFMTEIIKFFNAKSFEVRQMAAELLYSMVLVPKHRKKFVQDDRNIGLLLQSLDSEEGNSGNNKVLITILMSLTNCNSGRKKIVNSGYLKSIEKLAEAEVSDAKRLVRKLSANRFRSMLSGIWHS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01985 581 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 371 IPR000225 GO:0005515
Pte13g01985 581 MobiDBLite consensus disorder prediction 1 22 - -
Pte13g01985 581 Gene3D - 162 570 IPR011989 -
Pte13g01985 581 SMART arm_5 447 487 IPR000225 GO:0005515
Pte13g01985 581 SMART arm_5 275 317 IPR000225 GO:0005515
Pte13g01985 581 SMART arm_5 234 274 IPR000225 GO:0005515
Pte13g01985 581 SMART arm_5 360 403 IPR000225 GO:0005515
Pte13g01985 581 SMART arm_5 318 358 IPR000225 GO:0005515
Pte13g01985 581 SMART arm_5 192 233 IPR000225 GO:0005515
Pte13g01985 581 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 286 330 IPR000225 GO:0005515
Pte13g01985 581 SUPERFAMILY ARM repeat 164 555 IPR016024 -
Pte13g01985 581 Coils Coil 549 569 - -
Pte13g01985 581 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 23 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01985 Pte-Chr13 32551810 32553936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01985 146 436 U-box Gene Family AT2G23140 24.573 2.11e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01985 - - qsa:O6P43_012559 852.818