Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01935 ATGTTGCAGGTCTCGATTCTACGAGTGAAGAAGTTGAAGGCTTTGAAGCCTCAAATCTTTGCTTTCTATGGAAACTCTCACTTCTCAACAGCCGCCGAGCCGTCATCAAGACAACACACTGCTCCGAAGGTTCCCAATCTTATTGGAGGCAACTTTGTTGATTCGAAATCATCAGCTTTCATTGATGTTATAAACCCTGCTACACAAGAAGTAGTTTCACAAGTTCCCTTGACCACAAATGACGAGTTTAAAGCTGCAGTAGCTGCGGCAAAGCAAGCATTCCCATCATGGCGTAATACCCCAATTACTACACGTCAACGTGTAATGCTCAAGCTTCAAGAGCTTATTCGCCGAGATATGGATAAACTGGCCTTGAATGTAACTACTGAACAAGGGAAGACATTGAAGGATGCACAAGGAGATGTCTTTCGTGGGCTAGAGGTGGTGGAACATGCTTGTGGAATGGCTACTCTGCAGATGGGGGAGTATGTTCCCAATGTTTCACATGGAATTGATACTTTTAGCATTAGAGAACCTCTCGGCATTTGTGCTGGCATTTGTCCTTTCAATTTTCCAGCAATGATTCCCTTATGGATGTTCCCAATTGCAGTTACATGTGGAAACACTTTCATCTTAAAACCATCTGAGAAAGATCCAGGTGCTTCTGTAATGCTAGCAGAATTAGCACTGGAGGCTGGGCTACCTGATGGTGTCTTAAACATAGTGCATGGGACACATGACATTGTCAATGCTATCTGTGATGACGACGACATAAAAGCTGTATCATTTGTGGGTTCAAATGTTGCTGGTATGCACATATATGCTAGAGCATCAGCTAAAGGGAAACGAGTTCAGTCTAATATGGGTGCCAAGAATCATGCGATCATCATGCCTGATGCAAATGTTGACGCTACGTTAAATTCTCTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAGAGGTGTATGGCTCTAAGTACTGTTGTCTTTGTTGGAGGTTTGAAGCACTGGGAAAATGAATTAGTGGAACGTGCCAAAGCTCTTAAAGTAAATGCTGGAATTGAACCTGATACTGATCTTGGTCCTGTGATCAGCAAACAGGCAAAGGAACGGATACAAGCATTAATTCAATCTGGGGTTGAAAGTGGTGCAAGGCTATTACTTGATGGTAGAGGAATTAAGGTTCCTGGATATGAATCAGGCAATTTTATTGGTCCCACCATCTTATCAGATATCACTGATGAAATGCAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTCCTCTGCATGGAGGCTGAAAGCTTAGAGCATGCTATCGACATCGTCAACAAAAATAAATATGGAAATGGGGCTTCTATATTTACAACATCTGGTGTTGCTGCAAGGAAATTCCAGACTGACATTGAGGCAGGGCAGGTTGGCATCAATGTTCCTATTCCTGTTCCGTTGCCTTTTTTCTCATTCACAGGCAGCAAGGCGTCTTTTGCTGGCAATCTGAATTTCTATGGTGAAACCCTGCTCGGACATGCTTTATTTCCGATGCATCAAAATCGACTCTGTGCTAACTTTACTGCTGATCAAACTGTTTTTGTTGACTTACAGGCAAGGCTGGAGTTAGTTTTTTCACCCAACTCAAAACAGTAA 1644 0.43 MLQVSILRVKKLKALKPQIFAFYGNSHFSTAAEPSSRQHTAPKVPNLIGGNFVDSKSSAFIDVINPATQEVVSQVPLTTNDEFKAAVAAAKQAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVPNVSHGIDTFSIREPLGICAGICPFNFPAMIPLWMFPIAVTCGNTFILKPSEKDPGASVMLAELALEAGLPDGVLNIVHGTHDIVNAICDDDDIKAVSFVGSNVAGMHIYARASAKGKRVQSNMGAKNHAIIMPDANVDATLNSLVAAGFGAAGQRCMALSTVVFVGGLKHWENELVERAKALKVNAGIEPDTDLGPVISKQAKERIQALIQSGVESGARLLLDGRGIKVPGYESGNFIGPTILSDITDEMQCYKEEIFGPVLLCMEAESLEHAIDIVNKNKYGNGASIFTTSGVAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGNLNFYGETLLGHALFPMHQNRLCANFTADQTVFVDLQARLELVFSPNSKQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01935 547 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 48 497 IPR016162 GO:0016491
Pte13g01935 547 SUPERFAMILY ALDH-like 39 499 IPR016161 GO:0016491
Pte13g01935 547 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 7 505 IPR010061 GO:0004491
Pte13g01935 547 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 48 295 - -
Pte13g01935 547 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 289 489 - -
Pte13g01935 547 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 289 489 IPR016163 GO:0016620
Pte13g01935 547 Pfam Aldehyde dehydrogenase family 52 498 IPR015590 GO:0016491
Pte13g01935 547 CDD ALDH_F6_MMSDH 44 503 IPR010061 GO:0004491
Pte13g01935 547 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Pte13g01935 547 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 46 504 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01935 Pte-Chr13 32088949 32094374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01935 6 507 Aldehyde Dehydrogenase Gene Family AT2G14170 79.167 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01935 K00140 - qsa:O6P43_012446 872.463