Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01912 ATGTATGATGCTAGGAATCTCGCTGTGGGGGATGAGTTAAAGGTGCCTCTCAGGTGTGCTTGTCCCACTTCGAATCAAACTGCAGCTGGGTTTCGTTACTTGTTGTCTTATATGATTACCTGGGGTGACTCTGTCTCTGCAATTGCTCAAATGTTTGGTGTTGATGAACAAACTGTTTTAGATGCAAATAAGCTTTCTTCTGTAGATCTTATCTTTCCCTTCACGCCAATTTTGGTCCCATTGAGGCAACAGCCTGCAAAGATCGTGCCTTTACTGTCTCCCCCGCCTCCTCCACCTGCTGGGCCTGGGCCTACTCTTCCATCACCGGCAAAATCTTCCAACAAGAAATGGGTTATTGTAGCTGTGGCAGTTGGGCTTGCAGTTGTTGCTATTGTTCTTCTTCTTGGATCTGTATGGTTCTGCTATTTACGTTCTCGGTTTCAGAAGAGTGAGGCTGAAGTTATCATCTGGCCTACCTCTACATCTGAATCACTTATCAAGGAAGTATCAGCAGAGTCAAAGTTTGATTCCAGATCTACAAAGGATGTGTCATGGTCTGTCACTTCTGAGGGGATTCATGATGCTATTAATTCTTTAACAGTGTACAAGTTTGAGGACCTAGAGAGAGCTACTGAGTTCTTCAGTGAAGAGAAGAGAATAATGGGGTCTTCTGTTTACAAGGCATGGTTGAATGGTGATGCTGCCGCAATCAAAGTCATCAAAGGAGATGTATCCTCGGAGATCAATATTGTCAAGAGCATCAATCACTCTAACATAATCAGGCTTTCAGGTATCTGCAGTCCTGTTAAGAATGGTAACAATTATCTTGTTTATGAGTTTGCTGAGAATGGATCTTTAGATGATTGGCTTCATAGCAAGCTAGATGAATCTTCTTCCACTTTGACATGGAAACAAAGGGCTCAGATTGCGTATGATATAGCAGATGCTCTTAATTACCTCCACAATTACACTAATCCTCCTTATATTCACAAGAACTTGAAATCTAGTAATGTTCTCTTGGATAGCAACATGAGATCCAAGATCTCTAATTTTGCATCGGCAAGAACTCTTGGTAGTGGTGATGATTTTGTAGAGGAAGAGGAGGGTGTTAGAGTTCAGATGACTAGACATGTAATTGGCACTCAAGGTTATATGGCACCTGAGTACATGGAAAATGGATTGATTACCCCTAAGCTTGATGTTTTTGCTTTTGGGGTTGTCATGTTGGAGCTCTTGTCTGGAAAAGAAGCAATTTTTGGTGTGGGAGAGAAGGACAATGGAGGACAGAAAGAGCGGTTGCTGTCCTCATATGTAAGTGAGGTTCTTGAAGGAGATAATGTGAGAGAGAAGCTGCAAAGCTTCGTTGATCCAAATCTTAGGGGCCAATACCCATTGGATTTGGCTTTCTCCATGGCACAGCTTGCCAGAGAATGTGTTGGTTCCAACCTTGGCCGTCGACCAGCCATGCCTGAAATTTTCATGACCATGTCCAAGATTCTATCCTCCTCCTTGGATTGGGATCCATCAATAGTCTATGCTACTTATGACTCCGATCCAGATACAAGATGA 1569 0.4283 MYDARNLAVGDELKVPLRCACPTSNQTAAGFRYLLSYMITWGDSVSAIAQMFGVDEQTVLDANKLSSVDLIFPFTPILVPLRQQPAKIVPLLSPPPPPPAGPGPTLPSPAKSSNKKWVIVAVAVGLAVVAIVLLLGSVWFCYLRSRFQKSEAEVIIWPTSTSESLIKEVSAESKFDSRSTKDVSWSVTSEGIHDAINSLTVYKFEDLERATEFFSEEKRIMGSSVYKAWLNGDAAAIKVIKGDVSSEINIVKSINHSNIIRLSGICSPVKNGNNYLVYEFAENGSLDDWLHSKLDESSSTLTWKQRAQIAYDIADALNYLHNYTNPPYIHKNLKSSNVLLDSNMRSKISNFASARTLGSGDDFVEEEEGVRVQMTRHVIGTQGYMAPEYMENGLITPKLDVFAFGVVMLELLSGKEAIFGVGEKDNGGQKERLLSSYVSEVLEGDNVREKLQSFVDPNLRGQYPLDLAFSMAQLARECVGSNLGRRPAMPEIFMTMSKILSSSLDWDPSIVYATYDSDPDTR* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01912 522 ProSiteProfiles Protein kinase domain profile. 211 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01912 522 SMART LysM_2 36 80 IPR018392 -
Pte13g01912 522 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 509 - -
Pte13g01912 522 MobiDBLite consensus disorder prediction 90 106 - -
Pte13g01912 522 Pfam Protein kinase domain 231 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01912 522 FunFam PTI1-like tyrosine-protein kinase 3 281 510 - -
Pte13g01912 522 Gene3D Phosphorylase Kinase; domain 1 186 280 - -
Pte13g01912 522 SUPERFAMILY Protein kinase-like (PK-like) 199 494 IPR011009 -
Pte13g01912 522 Gene3D LysM domain 35 87 IPR036779 -
Pte13g01912 522 MobiDBLite consensus disorder prediction 90 109 - -
Pte13g01912 522 Gene3D Transferase(Phosphotransferase) domain 1 281 508 - -
Pte13g01912 522 CDD LysM 36 73 IPR018392 -
Pte13g01912 522 ProSiteProfiles LysM domain profile. 35 79 IPR018392 -
Pte13g01912 522 Pfam LysM domain 38 80 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01912 Pte-Chr13 31862092 31864600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01912 2 509 Receptor kinase-like Gene Family AT2G33580 50.290 1.07e-156 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte13g01912 Pkinase 4.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01912 - - qsu:112024590 568.155