Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01906 ATGAACAATGGAGAAATTGAAGGTGGTGGCCGTGATAGTGGTGGAGAGGAGGATTTCCGACCTCAAATGATAGGTCGCAAGTACCGCCCTGTTGTCGACGATGAGCGTGCTGTTATTGAAATGTCTTCCATGGAACCCAATTACTCTTCCACTATCAAAACATATAATGCGGGTGTACAGGCCAACATGGATTCAGAAAAAACAGATGGTATTCCTTCTGCTCAAACACGAGCTAATGGTCCCCAAGGAGAATCCAACTTAGAGTTGTTTGGTTTCTCGCTTGTAAACATTCTTGGTCTCAAAAGTATGACAGGTGAGCAAATTCAGCAGCCTTCTAGTCCCAGAGAAGGTGAAGATGTTTCCATCACTATTGGACAGCCAAAGGAAAATATTGTCAAAAGTGGCACAATGATGGGCGTGTTTATCCCATGTCTACAGAACATAATGGGAATCATATACTATATTCGTTTTTCTTGGATTGTTGGTATGGCTGGAATTGGAGAGTCCCTGTTGCTTGTTGCATTTTGTGGCACATGTACTTTCCTAACTTCAATATCATTAAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGCCCATACTATCTCATTGGCCGTGCCCTTGGTCCAGAAGTTGGAGTCAGCATTGGTCTGTGTTTCTTCCTTGGAAATGCAGTTGCTGGAGCTCTATATGTATTGGGAGCTGTAGAAACCTTTCTTAAAGCTGTGCCAGCTGCTGGGATATTTAGAGAGACTGTCACACAAGTTAATGGCACTGCAGTTGCACCAATACAGAGCCCAAGTTCGCATGACCTGCAAATTTATGGAATCGTTGTGACCATCCTCTTATGCTTTATTGTGTTTGGAGGTGTAAAAATGATCAATAGGGTGGCACCAGCCTTTTTAATTCCTGTTCTATTCTCGCTTGTCTGCATATTTATTGGAATTCTTACGGCGAGGAATGGACATCCAGCAGATGGCATTACGGGATTGAGTTTGACAAGTTTCAAAGAAAATTGGAGTGCAGATTATCAAAATACTAACGACAATGGAATTCCTGATCCTAATGGATATGTGTCTTGGAACTTTAATGCGATGGTTGGTCTCTTTTTTCCAGCTGTAACTGGAATAATGGCAGGGTCAAATCGATCTGCATCACTCAAGGATACTCAGCGATCCATTCCCATTGGAACCTTGGCTGCAACACTCACTACAACTGGTCTTTATTTTATTACAGTTTTCTTCTTTGGAGCTGTTGCCACAAGACAGAAACTTTTGACTGACAGGCTACTTACAGCGACTATCGCCTGGCCTCTTCCTGGGATCATTTATGTTGGTATCATCCTTTCAACCTTGGGTGCTGCTCTTCAAAGCTTGACAGGTGCTCCACGTCTGCTCGCAGCAATTGCCAATGATGATATCCTTCCTGTTCTCAACTACTTCAAGATTGCCGATGGAAGTGAGCCTTACGCTGCTACACTATTTACTGCATTACTCTGTATTGGATGTGTTGTGATAGGGAACCTCGATTTGATCACACCCACTATAACGATGTTCTACCTGCTATGTTATTCGGGCGTGAACTTGTCTTGCTTTCTTCTGGATCTGCTAGATGCCCCCAGCTGGCGTCCTCGGTGGAAATTTCACCACTGGAGCCTCTCTTTTCTAGGAGCAGCACTATGCATAGTGATTATGTTCTTGATCTCGTGGGCTTTCACAGTGGTGTCTCTAGCACTTGCTAGTCTCATATATTACTATGTAAGCATCAAAGGGAAGGCTGGGGACTGGGGAGATGGCTTCAAGAGTGCTTATTTCCAACTGGCCCTTCGTAGTCTTCGATCACTTGGAGCAAACCAAGTGCATCCAAAGAATTGGTATCCTATCCCACTGATATTCTGCCGTCCATGGGGCAAACTGCCAGAAAATGTACCCTGCCATCCAAAGCTTGCAGATTTTGCAAATTGCATGAAGAAAAAAGGCAGGGGAATGTCAATATTTGTGTCTATTATGGATGGAGACTACCATGAATGTGCTGAAGATGCCAAAGAAGCCTGCAAACAGCTTGCTACCTATATTGATTATAAGAACTGTGAAGGAGTAGCGGAGATAGTTGTTGCCCCCAATATGTCTCAAGGCTTTCGGGGCATTGTTCAGACAATGGGGTTAGGAAATCTAAAGCCAAACATTGTGGTGATGCGGTATCCAGAAATATGGCGTCGCGAAAACTTAACCGAAATACCTGCTAACTTTGTCGAGATAATTAATGACTGCATAGTTGCGAACAAGGCAGTTGTCATTGTAAAGGGTCTTGATGAATGGCCTAATGAGTACCAAAGGCAGTATGGTACCATTGATTTGTATTGGATCGTTAAAGATGGTGGTCTCATGCTACTTCTTTCTCAGCTTCTTCTTACCAAGGAGAGTTTCGAGAGCTGTAAAATCCAAGTCTTCTGCATTGCTGAAGAGGACTCAGATGCTGGAAGTCTCAAAGCTGATGTGAAGAAGTTTCTCTATGATCTTAGAATGCAAGCTGAAGTCATTGTGATAACAATGAAATCATGGGATGCTCAACCAGATGGTGTGTCTCAGCCTGATGAATCATTGGAAGCTTTTAGAGGTGCCCATCAGAGGATTAGTGATTACTTTTCTCAGATGAAAGTTACTGCTGAGAGAGAAGGCAAGCCACTAATGGCTGACGGAAAGTATGTGGATGTGAATGAGAGTAAAGTGGAAAAGTTCCTTTACACAACGCAGAAGCTTAATAATACAATTTTGAGATATTCAAGGATGGCGGCAGTTGTGCTGGTAAGTTTGCCTCCACCACCAGCAAACCATCCAGCATACTTCTACATGGAGTATATGGATCTCTTGGTGGAGAACATTCCTAGGCTTTTAATTGTAAGAGGATATCATAGAGATGTTGTAACGTTATTCACGTAG 2943 0.4322 MNNGEIEGGGRDSGGEEDFRPQMIGRKYRPVVDDERAVIEMSSMEPNYSSTIKTYNAGVQANMDSEKTDGIPSAQTRANGPQGESNLELFGFSLVNILGLKSMTGEQIQQPSSPREGEDVSITIGQPKENIVKSGTMMGVFIPCLQNIMGIIYYIRFSWIVGMAGIGESLLLVAFCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPAAGIFRETVTQVNGTAVAPIQSPSSHDLQIYGIVVTILLCFIVFGGVKMINRVAPAFLIPVLFSLVCIFIGILTARNGHPADGITGLSLTSFKENWSADYQNTNDNGIPDPNGYVSWNFNAMVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTGLYFITVFFFGAVATRQKLLTDRLLTATIAWPLPGIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKIADGSEPYAATLFTALLCIGCVVIGNLDLITPTITMFYLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSFLGAALCIVIMFLISWAFTVVSLALASLIYYYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSIMDGDYHECAEDAKEACKQLATYIDYKNCEGVAEIVVAPNMSQGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPANFVEIINDCIVANKAVVIVKGLDEWPNEYQRQYGTIDLYWIVKDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAGSLKADVKKFLYDLRMQAEVIVITMKSWDAQPDGVSQPDESLEAFRGAHQRISDYFSQMKVTAEREGKPLMADGKYVDVNESKVEKFLYTTQKLNNTILRYSRMAAVVLVSLPPPPANHPAYFYMEYMDLLVENIPRLLIVRGYHRDVVTLFT* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01906 980 Gene3D Amino acid/polyamine transporter I 133 596 - -
Pte13g01906 980 MobiDBLite consensus disorder prediction 10 27 - -
Pte13g01906 980 Pfam Solute carrier family 12 648 769 IPR018491 GO:0006811|GO:0016020|GO:0022857
Pte13g01906 980 Pfam Solute carrier family 12 780 979 IPR018491 GO:0006811|GO:0016020|GO:0022857
Pte13g01906 980 MobiDBLite consensus disorder prediction 1 27 - -
Pte13g01906 980 FunFam Cation-chloride cotransporter 1 133 596 - -
Pte13g01906 980 NCBIfam K-Cl cotransporter 62 980 IPR004842 GO:0006811|GO:0015377|GO:0016020
Pte13g01906 980 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 102 977 IPR004842 GO:0006811|GO:0015377|GO:0016020
Pte13g01906 980 Pfam Amino acid permease 139 614 IPR004841 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01906 Pte-Chr13 31787406 31815073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01906 135 981 Inorganic Solute Cotransporters AT1G30450 84.570 0.0 1457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01906 K14427 - qsa:O6P43_013080 1627.84