Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01897 ATGTTTGCGTCAACCATGGACAACTATCAAGCTGGTGATTTGATTGACATAGTAAGAGCAAGCAGTGGTGGAGCTGCCTATGGTGGCTGCACCCCCTCCGCGGCAACAACGTCCGATGCTGCTGTTTCTGACTGGAACTTCTCTGCACCTAATCCTATGATGAGTTTTTCAGCTGTTTTAGGAGAAGCATCCGGCAGAGAAAACTTCGGTGATCCTTTCTCCACCATGAGAGATCCTTTACTTTGTGACCTTGATCATGTATCTGCAGCTTCTTCAAGATTGTACAATAATACTACTTCTTTTACTGAAATCATCAGTTCAACCACTACAGGTTGTACAGATGACTCAACTGGTTTTGGTGGGGGTACTGCTTTAGCTCAAAATCTTAGAATGGAGGGTACTGGTATCCAGAGGTCACCTTGCAACTTGTTCTCGCAGATGATTCAGATCTCTCCAAACGCAAAGCTGCCCCTTTCTCCATGTGAGTCGCCGGTCATGGCGGTTGCTTCCCCTAGAGGAATTCCGCCACCTGCTATGATTTCAAGCGACATGATTAATGTCAACAGCTCCAAAACTTGTTTGGTTGACAACGCAGCTATGCAGATCTCATCCCCACGAAATCCGGGTCATAAACGAAGGAAGAGCCAGGCAAAGAAGGTAGTTTGTATTCCAGCACCAGCACCTTCAAATAACAGACCAAGTGGAGAAGTGGTTCCTTCAGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCTATTAAAGGCTCTCCTTATCCTAGAGGTTACTACCGATGTAGCAGTTCAAAAGGTTGCTCTGCAAGGAAACAAGTGGAGAGGAGCAGAACTGACCCTAACATGTTGGTCATTACATACACCTCTGAGCACAATCATCCATGGCCAACACAAAGAAATGCTCTAGCTGGTTCGTCAAGGTCACAGCTGGCCAAGAACAACGCTTCATCAAATAAAAACATCTCAGCCACCTCACAGTCCCACAAGTTCACAACAAAACCTAAAGAAGAACAGAAAGAAAGCAACAGCGATCCTTGTAATAATTTGTCACCTGTTACTGCTGGCAACTCTAACTCGACGTCGACTGTGAAAGAAGAGATGGAAGATGCAGAGAAACAACTGGAAATGCAGGATGACGAAGGATTCGGCGATGGATTACCTTACAAACCCTCTATGATGGATTCTAACCAGTCCGACGATTTCTTTGCAGAGTTGGGGGAATTAGAAGCTGATCCTTTAAATCTCTTGTTTGCTAATCAAGGTTTCAGTGCAGACGAGCAGAAAGGAATCAAGGGTCTTGATCCCTTCAACCTTTTTGATTGGTCTGGAGAATATGACGGCAACAATACCAGCTTATCATCTGGGGACACTAAGAAAACCAGACCTTGA 1401 0.4518 MFASTMDNYQAGDLIDIVRASSGGAAYGGCTPSAATTSDAAVSDWNFSAPNPMMSFSAVLGEASGRENFGDPFSTMRDPLLCDLDHVSAASSRLYNNTTSFTEIISSTTTGCTDDSTGFGGGTALAQNLRMEGTGIQRSPCNLFSQMIQISPNAKLPLSPCESPVMAVASPRGIPPPAMISSDMINVNSSKTCLVDNAAMQISSPRNPGHKRRKSQAKKVVCIPAPAPSNNRPSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQLAKNNASSNKNISATSQSHKFTTKPKEEQKESNSDPCNNLSPVTAGNSNSTSTVKEEMEDAEKQLEMQDDEGFGDGLPYKPSMMDSNQSDDFFAELGELEADPLNLLFANQGFSADEQKGIKGLDPFNLFDWSGEYDGNNTSLSSGDTKKTRP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01897 466 ProSiteProfiles WRKY domain profile. 234 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01897 466 MobiDBLite consensus disorder prediction 347 367 - -
Pte13g01897 466 SUPERFAMILY WRKY DNA-binding domain 237 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01897 466 MobiDBLite consensus disorder prediction 292 333 - -
Pte13g01897 466 Pfam WRKY DNA -binding domain 241 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01897 466 SMART WRKY_cls 239 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01897 466 FunFam probable WRKY transcription factor 14 213 293 - -
Pte13g01897 466 Coils Coil 364 384 - -
Pte13g01897 466 Gene3D WRKY domain 213 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01897 466 MobiDBLite consensus disorder prediction 292 373 - -
Pte13g01897 466 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 420 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01897 Pte-Chr13 31597152 31600424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01897 6 453 WRKY Transcription Factor Family AT1G30650 42.038 2.60e-88 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g01897 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01897 - - aprc:113852911 490.73