Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01891 CTTTTTAGGCTTTTGATGTCGTCCCTCTTTCTGTTGTCCGTAATGGCTCAGCTTCCTTCACAAGACATTTTGACACTTCTTCAATTTAAGAAAGGCATCAAACATGATCCCGCTGGTTATGTTATCAATTCCTGGAATGAAGAGTCTATTGATTTTGATGGGTGCCCTTCTTCATGGAATGGAATTCTGTGCAATGGTGGCAACGTTGCAGGCGTTAAGCTCGACAACTTGGGACTCTCCGCTGAGGTGGACTTGAGTGTATTCGCCAACCTTACAAAGCTTGTCACACTCTCAATGTCAAATAACTCAATCTCAGGAAAGTTCCCAGAAAATGTAGCTCAATTCCGTAGTCTTGAGTTCATGGATATCTCTGATAATCTGTTCTCTTCCTCATTGCCAACGGGGATAGGTAGCTTAGCAAACTTGAGAAACTTGTCGCTTGCAGGAAACAACTTTTCTGGCTCCATTCCCGACTCAATTTCAGGTCTCGCTTCAATTCAATCTTTGGACTTGAGTCGCAACTCTTTATCTGGGGTGTTGCCAAAATCATTAACAGAGCTTGCCACACTGGTGTCGCTTAATCTATCTCACAATAGCTTCACGGGAAAGATACCTAAAGGTTTTGAGATGATGTCTAGTCTTAAACATCTGAATCTGAGCCATAACCAGCTTACTAGTTCACTAGTTAGTGGAGGTGATCCAATGTTTGAGAACTTGGTTGTGTTGGACTTGAGCTATAATCAGCTTTCTGGGGAATTGCCCGAATTTAACTTCGTCTACGATCTTCAGGTTCTCAAGCTTAGTAACAACAGATTTTCTGGACTCATTCCAAATGATCTGTTAAAGGGAGATTCTTTGGTTCTATCTGAGCTGGATCTAAGTGCAAACAATCTGTCAGGTACCTTAATTATTATCACATCTACAACGCTGCGAATTTTGAATCTTTCATCCAATGCAATCGCTGGTCAGCTCCCATTGTTGACTGGAAGCTGTGCTGTACTTGATCTCTCAAACAACAAAATTGAAGGAAATTTGACCAGGATTTCTAAATGGGGAAATATCGAGTTTCTTGATCTCAGCAACAATCATATCACCAGTCCCATCCCCGACATAACTCCCCAATTTTTACGCCTTCACCACCTCAACATTTCCCACAACTCCCTAAGTGGCTCTCTTCCTAATGTCATCACACAGTATCCAAAGCTTACGGTGCTTGATGTCAGTTCAAACCAGTTGGATGGGCATGTACCGAGTAATCTGCTTATGATGCCCACTTTGCAAGAACTCCATCTCGAGAATAACTTAATGTCTGGTGGCATTAATATATCTGGTCCTCTCGGTCGCTCATCAAATCTACGGGTTCTTGATCTTTCTCATAATCAGTTTGATGGATATTTTCCTGATCAATTTGGGAGCTTAGCTGGCCTTCAATTCCTCAGTATTGCTGGAAATAAATATTCTGGCTCTCTACCAACATCAATTGCTGATCTGAAATCATTGAGTTTATTGGATATGTCCCAGAACCAATTCACAGGTCCATTGCCAAGCAACTTGCCAAATAGCCTAGAAAACTTCAACGTTTCATATAATGATCTATCTGGAGTTGTTCCTGAAAATCTGAGAAAGTTTCCCACTTCTTCGTTCTATCCTGGGAATTCTAGATTGCTTCTTCCTAATGTTCCCCCTGGGTCAACCAATAGCCATCCAGAAAGTTCGAAGGGGAAACCACTTAGCACTATTGTGAAGGTGGTTATTATTGTCTCCTGTGTGATTGCTATAATCAGTCCTGATGAAAAAGCTGCAGCTGCAACTGGCTTCTCCCCCTCAAAGAAAAGCCAGTTCTCTTGGTCACCTGGATCAGGTGATTCATACACTTCGGAAAGTCTCCCGAGAATGGATGTAAGGTCACCAGATAAATTGGTTGGTGAGTTGCATTTCCTTGATGACTCAATAACACTGACACCAGAAGAGCTTTCAAGAGCCCCAGCTGAAGTTCTAGGGAGAAGTAGTCACGGTACTTCTTACCGAGCAACGTTAGAGAATGGTATGTTTATGACAGTAAAATGGTTGAGAGAAGGAGTAGCAAAACAGAGGAAAGAGTTCGCGAAGGAGGCTAAGAAATTTGGAAACATTAGACATCCAAATGTGGTCGGTTTGAGAGGATATTACTGGGGTCCCACTCAGCATGAGAAGCTCATCCTTTCAGATTATATCTCTCCTGGAAGTCTTGCAAGCTTTCTATATGGGCGAAAAGGTCCACCATTAACTTGGGAGCAAAGACTCAAAATTGCAGTTGATGTTGCACGGGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCACATGGTAACCTCAAGGCAACAAACGTTCTACTAGATGGCCCTGATCTGAATTCTCGCGTTGCTGATTACTGTCTGCACCGTCTCATGACTCAAGCCGGAACCATTGAACAAATACTTGATGCGGGGATCTTGGGTTATCGTGCACCAGAACTGGCTGCAACAAAAAAGCCAATGCCCTCCTTCAAGTCTGATGTCTATGCCTTTGGAGTGATCCTGCTGGAACTTCTGACTGGAAGGTGTGCTGGTGATGTCATTTCTTCTGAGCAAGGTAATGTCGATTTGACAGAATGGGTAAAAGTTCAAGTATCCGGAGGTCACGGCTCCGATTGCTTTGATGCTTCATTGAAGCAAGAGATGATAAATCCAGTGGCGGAGAAGGGAATGAAGGAGGTTCTGGGAATTGCTCTTAGATGCATAAGGTCTGTGTCTGAGAGACCAGGTATCAAGACTATATATGAAGATCTTTCTTCCATA 2817 0.4295 LFRLLMSSLFLLSVMAQLPSQDILTLLQFKKGIKHDPAGYVINSWNEESIDFDGCPSSWNGILCNGGNVAGVKLDNLGLSAEVDLSVFANLTKLVTLSMSNNSISGKFPENVAQFRSLEFMDISDNLFSSSLPTGIGSLANLRNLSLAGNNFSGSIPDSISGLASIQSLDLSRNSLSGVLPKSLTELATLVSLNLSHNSFTGKIPKGFEMMSSLKHLNLSHNQLTSSLVSGGDPMFENLVVLDLSYNQLSGELPEFNFVYDLQVLKLSNNRFSGLIPNDLLKGDSLVLSELDLSANNLSGTLIIITSTTLRILNLSSNAIAGQLPLLTGSCAVLDLSNNKIEGNLTRISKWGNIEFLDLSNNHITSPIPDITPQFLRLHHLNISHNSLSGSLPNVITQYPKLTVLDVSSNQLDGHVPSNLLMMPTLQELHLENNLMSGGINISGPLGRSSNLRVLDLSHNQFDGYFPDQFGSLAGLQFLSIAGNKYSGSLPTSIADLKSLSLLDMSQNQFTGPLPSNLPNSLENFNVSYNDLSGVVPENLRKFPTSSFYPGNSRLLLPNVPPGSTNSHPESSKGKPLSTIVKVVIIVSCVIAIISPDEKAAAATGFSPSKKSQFSWSPGSGDSYTSESLPRMDVRSPDKLVGELHFLDDSITLTPEELSRAPAEVLGRSSHGTSYRATLENGMFMTVKWLREGVAKQRKEFAKEAKKFGNIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYGRKGPPLTWEQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDGPDLNSRVADYCLHRLMTQAGTIEQILDAGILGYRAPELAATKKPMPSFKSDVYAFGVILLELLTGRCAGDVISSEQGNVDLTEWVKVQVSGGHGSDCFDASLKQEMINPVAEKGMKEVLGIALRCIRSVSERPGIKTIYEDLSSI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01891 939 ProSiteProfiles Protein kinase domain profile. 660 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01891 939 ProSiteProfiles Leucine-rich repeat profile. 238 260 IPR001611 GO:0005515
Pte13g01891 939 Pfam Leucine rich repeat N-terminal domain 20 65 IPR013210 -
Pte13g01891 939 SUPERFAMILY L domain-like 429 546 - -
Pte13g01891 939 Gene3D Phosphorylase Kinase; domain 1 651 737 - -
Pte13g01891 939 PRINTS Leucine-rich repeat signature 211 224 - -
Pte13g01891 939 PRINTS Leucine-rich repeat signature 166 179 - -
Pte13g01891 939 Pfam Protein tyrosine and serine/threonine kinase 664 861 IPR001245 GO:0004672|GO:0006468
Pte13g01891 939 PANTHER OS07G0626500 PROTEIN 601 939 - -
Pte13g01891 939 SUPERFAMILY Protein kinase-like (PK-like) 663 936 IPR011009 -
Pte13g01891 939 FunFam Pollen receptor-like kinase 1 738 939 - -
Pte13g01891 939 SMART LRR_typ_2 236 258 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 163 186 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 91 115 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 399 423 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 187 210 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 211 234 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 259 283 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 497 521 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 450 472 IPR003591 -
Pte13g01891 939 SMART LRR_typ_2 139 162 IPR003591 -
Pte13g01891 939 Pfam Leucine rich repeat 166 224 IPR001611 GO:0005515
Pte13g01891 939 Pfam Leucine rich repeat 357 412 IPR001611 GO:0005515
Pte13g01891 939 Pfam Leucine rich repeat 450 510 IPR001611 GO:0005515
Pte13g01891 939 SUPERFAMILY L domain-like 237 343 - -
Pte13g01891 939 Gene3D Ribonuclease Inhibitor 135 234 IPR032675 -
Pte13g01891 939 SUPERFAMILY L domain-like 35 440 - -
Pte13g01891 939 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 330 560 - -
Pte13g01891 939 Pfam Leucine Rich repeat 307 321 IPR001611 GO:0005515
Pte13g01891 939 Gene3D Transferase(Phosphotransferase) domain 1 738 939 - -
Pte13g01891 939 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 18 231 - -
Pte13g01891 939 MobiDBLite consensus disorder prediction 608 630 - -
Pte13g01891 939 FunFam Leucine-rich repeat receptor-like protein kinase 645 737 - -
Pte13g01891 939 Gene3D Ribonuclease Inhibitor 235 566 IPR032675 -
Pte13g01891 939 ProSiteProfiles Leucine-rich repeat profile. 353 375 IPR001611 GO:0005515
Pte13g01891 939 MobiDBLite consensus disorder prediction 608 631 - -
Pte13g01891 939 Gene3D Ribonuclease Inhibitor 22 134 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01891 Pte-Chr13 31533126 31537167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01891 1 927 Receptor kinase-like Gene Family AT3G56370 31.505 1.10e-102 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte13g01891 PK_Tyr_Ser-Thr 2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01891 - - rcn:112201363 1352.42