Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01883 ATGACAGTTACGGAGGACCATAAGATCGTTGAGAGAAAACATGTCTTGGTTGGTATAAATTTGGACAGAGAAAGCAGAGAGCTGCTCAACTGGGCACTTGTCAAAGTTGCTGAACCTGGAGATTGGGTTATTGCAGTTCATGTTTGTAGTTGTGCTGATGATGTCGACAAAAACAACAAGCTGTTGGATGGTTATTTGAAGGTTTATGATGGTCTACGTTGTTTGAAAAGCGTTGAACTTACTGGTAAAGTATTTACAGGAAGATCTATACGTAAAACTCTATTAAGAGAAGCAAAGAATCATCATGCTGCGGCAGTAGTGGTAGGAGTAAGCAAACACAATAGTATAGGTGGTTGGCTTTCAACAGCGAAATACTTCGCCAAGAGATTACCAGTTAGTACTGATGTTCTAGCTATCCATAATGGAAAAATTGTCTTCAGAAGATGCACCGGTATTCAGCTACCAGATCATAAGGTAGACCTTGAATCCAAGCGTTGTCTTAGAAGTAATGATAAGGAAAATCAATCTGAGCTTGGGCGTTTAGAGGTTGAGTCCAGGAAATCCACATTTATGATGGTCAAGAACACAAAGCATATGTCAAAACAAAGTATTGAAAGTGTGCGAGAGGAGTTTAGTACTTGTGGCCAACAAGAGCTTGGTTGGCCTCTGCTGCATAAACCAACTTCTGATAAAGTTGAAGCCAGACATGCTCCCAGACATTCAAGAAGCATGTCTGTGGTGCAATGGGTGATGAGCTTACCAGATCGTTCACCACAGCAAAGTCCTCATTGTTTTCAAATTAAAGAGAACCTTTTTGAAAGGAACCTCAGTGACATTGAAGATGAGCTTCCAAATGGTTTAGAGGACATACTGAAGGCGAAATCATCTGATTGCAAGTTCTTCAGTTATGAGCTTCTGTCCACCTATACTTCTCAGTTCTCCTCAAAAACTCTAATTGGGAAGGGAGGATCTAACCGAGTTTACAAAGGAAATCTTCCTGATGGTAAGCAAGTTGCAGTAAAAGTTCTTCAGGCATCAAAGGAAGCTATGAAGGATTTTGTTGGTGAAGTTGAAATCATCTCCTCATTGAAACATAAGAACATTACCACCCTACTTGGGGTTTCCATTGCAGATAATGCTTTGATATCTGTGTATGATTTCTTCCCTCGAGGAAGCTTGGAGGAAAGTTTACATGGAAAGAGCAGTCATGAGTTTTGTTTATCTTGGGAGGCCAGATTTAACATAGCCATAGGAATTGCTGAAGCTCTGCATTATTTGCACAAGGAATGCGCCAAACCTGTAATTCATAGAGATATCAAGTCTTCCAACATTCTTCTTTCTGACCAGCTTCAGCCACAGTTGTCTGATTTTGGTCTTGCAATATGGGGACCGACAACTTCATCGTCTCTGACTCAAGAAGATATTGTTGGAACATTTGGTTACCTTGCTCCTGAGTATTTTATGTATGGCAAGGTCAGTGACAAGATCGACGTCTATGCATTTGGTGTAGTCCTGCTTGAATTAATATCAGGAAGAAAACCTATTGGCTCTGAGACCCCAAAAGAACAGGAGAGCTTGGTCATGTGGGCTAGACCAATCATAGAGAATGATGATGTGAAAGGCATATTGGATCCAAATTTGAATGAAAAGTTCAATGAGGATGAAATGCAGAGAATGGTGCTTGCGGCATCCTTGTGTATCACTAGGTCAGCTCGAATTCGACCTCAAATAGGCCAGATATTGGAGATCCTGAAGGGGAACAAAGATGTCAAGAAGTTCAGGAACTCCAAAATGCACAACCACGTTCAGGACTCAAAACAGCAGGAAAATGCAGATGATGATGATGATGATGATGATGATGATGAAGTTTATCCAAACTCTAGTACAGATTTGCACCTAAGTCTTGCACTGCTTGATGTTGAGGATGACACTGCATCATTTAGCAGTCTGGAGAGAAGCAGCCCCTATTTGGAAGAATACTTGAGAAGCAGATGTAGCAGATCTTCGAGCTTTGATTAG 2019 0.4101 MTVTEDHKIVERKHVLVGINLDRESRELLNWALVKVAEPGDWVIAVHVCSCADDVDKNNKLLDGYLKVYDGLRCLKSVELTGKVFTGRSIRKTLLREAKNHHAAAVVVGVSKHNSIGGWLSTAKYFAKRLPVSTDVLAIHNGKIVFRRCTGIQLPDHKVDLESKRCLRSNDKENQSELGRLEVESRKSTFMMVKNTKHMSKQSIESVREEFSTCGQQELGWPLLHKPTSDKVEARHAPRHSRSMSVVQWVMSLPDRSPQQSPHCFQIKENLFERNLSDIEDELPNGLEDILKAKSSDCKFFSYELLSTYTSQFSSKTLIGKGGSNRVYKGNLPDGKQVAVKVLQASKEAMKDFVGEVEIISSLKHKNITTLLGVSIADNALISVYDFFPRGSLEESLHGKSSHEFCLSWEARFNIAIGIAEALHYLHKECAKPVIHRDIKSSNILLSDQLQPQLSDFGLAIWGPTTSSSLTQEDIVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGRKPIGSETPKEQESLVMWARPIIENDDVKGILDPNLNEKFNEDEMQRMVLAASLCITRSARIRPQIGQILEILKGNKDVKKFRNSKMHNHVQDSKQQENADDDDDDDDDDEVYPNSSTDLHLSLALLDVEDDTASFSSLERSSPYLEEYLRSRCSRSSSFD* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01883 672 CDD USP_Like 14 139 - -
Pte13g01883 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Pte13g01883 672 Gene3D HUPs 12 141 IPR014729 -
Pte13g01883 672 SMART serkin_6 313 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01883 672 MobiDBLite consensus disorder prediction 609 624 - -
Pte13g01883 672 FunFam Putative receptor-like serine/threonine-protein kinase 388 600 - -
Pte13g01883 672 Gene3D Transferase(Phosphotransferase) domain 1 388 614 - -
Pte13g01883 672 Pfam Universal stress protein family 12 133 IPR006016 -
Pte13g01883 672 ProSiteProfiles Protein kinase domain profile. 313 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01883 672 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 282 387 - -
Pte13g01883 672 SUPERFAMILY Protein kinase-like (PK-like) 296 584 IPR011009 -
Pte13g01883 672 MobiDBLite consensus disorder prediction 598 627 - -
Pte13g01883 672 PANTHER OS08G0249100 PROTEIN 174 616 IPR046958 -
Pte13g01883 672 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 138 - -
Pte13g01883 672 Gene3D Phosphorylase Kinase; domain 1 282 387 - -
Pte13g01883 672 Pfam Protein kinase domain 314 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01883 Pte-Chr13 31463358 31466827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01883 301 610 Trihelix Transcription Factor Family AT1G70460 42.902 1.15e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte13g01883 Pkinase 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01883 - - cave:132166429 791.186