Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01882 ATGGATGACGGCGAGCTTGATTTCTCCAATCAGGAAGTCTTTTCTAGTTCAAACATGGGGGAGCTTCCGAGTTGCTCAATGGATAGTTTCTTTGAAGAATTATTGCTGAACGATACACATGCTTGTACCCACACACATACCTGCAACCCTCCTGGTCCCGACAATTCACATACTCATACTTGTTTTCACGTACATACTAAAATTGTGTCTACTCCTGCTGAAGACAATGTTGCCACAGATGACACTGCTGAGTCATCAGATAAGAAGTCTAAGAAACGCCCCTTAGGTAATCGTGAAGCAGTTAGGAAGTATCGCGAGAAGAAGAAAGCCCGAGCTGCATCATTGGAGGATGAAGTTGCGAGATTGAGGTCAGTCAATCAGCAGTTATTAAAGAGGTTACAGGGCCAAGCTGCACTGGAGGCCGAAATATCCAGACTTAAGTGTTTACTTGTGGATATTCGTGGAAGGATTGAAGGGGAGATTGGAGCTTTTCCATATCAAAAATCCCTTAATCCAGCCATGACAAATCCAAGCTTGCCTGGCTCGTTCGCTGTCAATCCATGTAACATACAGTGCAATGAACAGGTTTATTGCCTTCGTCCAGTAGCGGATGGGAAATCTATGGAAAATGCATCCTTAACTATGCAAGAATTTAGTGGTTGTGAATTGGAAAGCCTCCAGTGTCTGGCAAATCAGAATTATGGGCTTAAGGAGCTTCCTGTTTGTGGGGCAGGGCAGGCAGTATCTGCTGTCAATTCTTCTAAAGGGAGAAAGAAGAAAGTTGAAGCCCGAAAATCTCTCATGTAA 807 0.4399 MDDGELDFSNQEVFSSSNMGELPSCSMDSFFEELLLNDTHACTHTHTCNPPGPDNSHTHTCFHVHTKIVSTPAEDNVATDDTAESSDKKSKKRPLGNREAVRKYREKKKARAASLEDEVARLRSVNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGAFPYQKSLNPAMTNPSLPGSFAVNPCNIQCNEQVYCLRPVADGKSMENASLTMQEFSGCELESLQCLANQNYGLKELPVCGAGQAVSAVNSSKGRKKKVEARKSLM* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01882 268 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Pte13g01882 268 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Pte13g01882 268 Coils Coil 98 132 - -
Pte13g01882 268 FunFam Basic leucine zipper 24 75 153 - -
Pte13g01882 268 MobiDBLite consensus disorder prediction 72 109 - -
Pte13g01882 268 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Pte13g01882 268 Gene3D - 77 153 - -
Pte13g01882 268 SUPERFAMILY Leucine zipper domain 90 134 IPR046347 GO:0003700|GO:0006355
Pte13g01882 268 CDD bZIP 91 144 - -
Pte13g01882 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Pte13g01882 268 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01882 Pte-Chr13 31459773 31460579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01882 1 264 bZIP Transcription Factor Family AT2G16770 65.789 1.78e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g01882 bZIP_2 1.7e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01882 K25785 - pvy:116124218 407.527