Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01870 ATGTTATCGGAGCTGATGAACTATTTGAGGGCCTGCTTTCGGCCAAGGTCGGATCGAAATGTAAGAAATGGTTCGGATACAGGTGGTCGACAAGATGGGCTACTGTGGTACAAAGATTTTGGACAGCACGTAAATGGTGAATTTTCTATGGCTGTGGTACAGGCCAACAATCTACTTGAGGATCAAAGCCAGATTGAATCCGGAAGTTTGAGCTCCCATGATACTGGTCCATATGGTACCTTCGTTGGTGTCTATGATGGGCATGGAGGTCCTGAGACATCACGCTATATTAATGATCACCTATTTCGACATCTCAAGAGATTTACCGCAGAGCAACAATCTATGTCCGTCGATGTCATCCGGAAGGCATTTCTGGCAACAGAGGAGGGATTCTTGTCCCTTGTCACAAAGCAATGGCCTATGAAACCACAAATTGCTGCAGTCGGCTCATGCTGTCTTGTTGGGGTTGTCTGTAATGGAACCCTTTATGTTGCAAACCTCGGTGATTCTCGTGCTGTTCTGGGGAGAGTTGTTAAGGCGACTGGAGAAGTTCTTGCCATTCAATTGTCTACCGAGCACAATGCTGCAATAGAGTCTGTTAGACAGGAGCTACATTCTATGCATCCAGATGACTCCCAGATTGTGGTATTAAAGCATAATGTTTGGCGTGTAAAAGGGCTTATACAGATTTCTAGATCCATAGGTGATGTATATTTGAAAAAGGCCGAGTTTAACAGAGAGCCACTTTATGCTAAGTTCCGACTTCGCGAACCTTTTAAGAGGCCCATTCTTAGTGCAGAACCATCAATATCAGAGCACAAATTGCAGCCCCATGATCAATTTGTTATATTTGCATCTGATGGTCTATGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAGAATCATCCTCGCAATGGAAGTGCAAAACGGCTGGTTAAAGCTGCCCTCCAAGGAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACTTGAAAAAAATTGATCGTGGGGTTAGGAGGCATTTCCACGATGACATCACTGTGATTGTTGTGTTTCTGGACTCAAATCTCGTAAGTAGGGTAAGCTCAGTTAAATGCCCTACTGTGTCTTTGCGAGGGGGCGGCATCTCCCTGCCTCCTAACACGCTGGCTCCTTGTACTACGCCAACTGAAGCTGGCGGTGCCTGA 1194 0.4539 MLSELMNYLRACFRPRSDRNVRNGSDTGGRQDGLLWYKDFGQHVNGEFSMAVVQANNLLEDQSQIESGSLSSHDTGPYGTFVGVYDGHGGPETSRYINDHLFRHLKRFTAEQQSMSVDVIRKAFLATEEGFLSLVTKQWPMKPQIAAVGSCCLVGVVCNGTLYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNAAIESVRQELHSMHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSAEPSISEHKLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPRNGSAKRLVKAALQGAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRVSSVKCPTVSLRGGGISLPPNTLAPCTTPTEAGGA* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01870 397 CDD PP2Cc 48 355 IPR001932 -
Pte13g01870 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Pte13g01870 397 Gene3D - 37 365 IPR036457 -
Pte13g01870 397 SMART PP2C_4 41 353 IPR001932 -
Pte13g01870 397 PANTHER PROTEIN PHOSPHATASE 32 353 IPR015655 GO:0004722|GO:0006470
Pte13g01870 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Pte13g01870 397 FunFam Phosphatase 2C family protein 36 365 - -
Pte13g01870 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pte13g01870 397 Pfam Protein phosphatase 2C 79 320 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01870 Pte-Chr13 31358133 31362369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01870 1 397 PP2C-type Phosphatase Gene Family AT4G38520 76.826 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01870 - K01102 jre:109006616 729.169