Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01864 ATGACTACTACATCTGATGAGGGAACTCACAGTAGAGATGTCATCGTGAGTATCAATGAAGGCAGTCCCAAAAGCAACATATGGAAGGGCTCAAGCTATGATTTTGGGAAAAATCCACAGGAGAGTGGTAATGGTGGTTTCGATTTCCAGCAACGTGCTGGCAATGATAAAGGTGGGCAAGCATCTCAGGATCCGGATGATCCGCCTTCCCAGTTGATTGGTCAGTTCTTGCATAAGCAGAAAGCTTCAGGGGATTTTGCGTTGGATATGGACTTAGAGATGGATGAGCTCCGTCAGGACAAGCATTTGGCTTCTGTGGACGAGTCTCCAACCACGGCGCGGGCTTCCAAGGAGCATAAGGTTACTTTTCACCCACCTATTATGAATGCGGTGGAGCAGCCTAACGATGCGGTAAGGAGAAGGTATAGGGATTCATTACTGGGTGAGGAGCTTAAGAGGCACCTGCAGCAGAGTGGCTCTGAGGCCAGTCCTAATACTGATGACCATGGAGGTGAAGTGGTGAGGTGTACCTCAAATGCTTCCTACGAGAGGACCATTTCCTTTCAGAGGAAGTCAAGTTTGTTGAAGACAAAAACGAAGTCCAGATTGCTTGACCCACCAGACGAACCGGACAGGAGATCAGGTCGGACGCCAAGGTCAGGGCAGATTAGATCTGGGTTTGTGGGTAGAATAGATGAAGAGGAAGAAGATCCCTTTATGGAAGAAGATCTACCAGAGGACTTCAACAAATCTAACTTCAATGCACTGACTCTGCTTCAGTGGGTGAGTTTGATATTGATTGTCGCTTCTTTGATTTGTACACTGTGTATTCCCTATTTGAGGTACAAGAATCTGTGGCAGCTTAGACTGTGGAAATGGGAAGTGATGGTTCTGGTTTTGATTTGTGGCCGTTTGGTTTCTGGTTGGGGAATCAGAATCATAGTGTATTTCGTTGAAAGGAATTTCCTTTTGAGGAAAAAGATTTTGTATTTTGTGTATGGAGTGAGGAGAGCAGTACAAAATTGTCTTTGGCTGGGCTTAGTTTTGATTGCTTGGCATTTTTTGTTTGATAAGAAAGTTCAGACGGGTCTCAAAACTAGCTTCCCTGTGATTGTCACTAAGATTTTGATCTGTTTGTTGGTGGGTACCTTGGTTTGGTTGGTGAAGACTCTCTTAGTTAAGGTGTTAGCTTCGTGTTTCCATGTCAGCACCTATTTTGATAGAATCCAAGAATCACTGTTTAATCAATTTGTCATTGAAACACTATCTGGGCCACCAGTAGTGGAAATGAGGAAAACGGAGGAGGAGGAAGAGAAACTTGCTGAAGAGGTCAGGAAAATGCAGAATGCTGGGATTACCATACCACCTGATCTCAAGGCGTCTGCATTCCAATCACCAAAGAGTGGAAGAGTAATTGGGAGTAGTGGCATCCAGAGAAGTCCTCGAGTTAATAAAAGTGGTGTTATTTCTCGGGAACCTTCCAGGACGCGAGAAGAAGGAATTACTATTGATCAACTCCACAAGTTGAATCCGGAAAATGTGTCTGCATGGAATATGAAAAGATTGATGAATATTATCCGTCATGGATCCATCACCACACTGGATGAGCATGCAATTGATTCTGCTTCATATGACGAGTCTGCCACTCAAATAAGAAGCGAAAATGAGGCAAAAGCAGCCGCAAAGAAGATATTTCAGAATGTCGCAAGACGTGGATGCAGGTATATCTACTTGGAAGATTTATTGCGCTTTATGCGAGAAGATGAAGCTGCAAAAACCATATGTCTCTTTGAAGGGGCCTTAGAGAGTTGTGAGAGTGGAAAGATTAGTAAATCAGCACTGAAGAACTGGGTGGTCCAAGCATTTAGAGACCGACGGGCACTTGCATTGACTTTGAATGATACGAAAACGGCAGTGAACAGACTTCATAGGATGCTCAACTTCCTTGTTGGTGTTGTTATATTCATCATTTGGCTTCTCATACTAGGAATTGCAACATCGAAGTTTCTTGTAGTTGCAACCTCTCAGCTAGTAGTCGCAGCATTTATATTCGGAAACACATGCAAGACTATATTTGAAGCAATAATATTCTTATTTGTGATCCATCCATTTGATGTTGGCGATAGGTGTGATATTGATGGAATTCAGATGGTTGTGGAAGAAATGAAGATTTTAACGACTGTATTTCTGAGGTATGATAATATGAAGGTTATCATTCCGAACGGTGTCCTTTCCACAAAACCCATCCACAACTACTATCGCAGTCCTGATATGGGAGATGCTGTTGAATTCTGTGTGCACGTAGCTACACCAGCAGAAAAGATTGCAGCTATCAAGCAGAGGATATCAAGTTACGTTGATAGCAAGAAGGAGCACTGGTATCCAAATCCTTTGTTCTTCATGAAGGATGTGGAAGAGTTGAACAGGTTAAGGATTGCAGTTTGGTTGGTTCACAGAATGACTTACCAAGACATAGGAGAGAGGTGGGTAAGACGAGGTCAATTAATCGAAGAGATGAGCAAGATCTTTCGCGAGCTCGACCTTCAGTATCGTTTGTACCCTACGGATATTAACATCCGTGCCGTGCCTACCGCTATCTCTGATCGGCTTCCTGCTTCGTGGGCGGCAGCCAAGAGTTAA 2640 0.4364 MTTTSDEGTHSRDVIVSINEGSPKSNIWKGSSYDFGKNPQESGNGGFDFQQRAGNDKGGQASQDPDDPPSQLIGQFLHKQKASGDFALDMDLEMDELRQDKHLASVDESPTTARASKEHKVTFHPPIMNAVEQPNDAVRRRYRDSLLGEELKRHLQQSGSEASPNTDDHGGEVVRCTSNASYERTISFQRKSSLLKTKTKSRLLDPPDEPDRRSGRTPRSGQIRSGFVGRIDEEEEDPFMEEDLPEDFNKSNFNALTLLQWVSLILIVASLICTLCIPYLRYKNLWQLRLWKWEVMVLVLICGRLVSGWGIRIIVYFVERNFLLRKKILYFVYGVRRAVQNCLWLGLVLIAWHFLFDKKVQTGLKTSFPVIVTKILICLLVGTLVWLVKTLLVKVLASCFHVSTYFDRIQESLFNQFVIETLSGPPVVEMRKTEEEEEKLAEEVRKMQNAGITIPPDLKASAFQSPKSGRVIGSSGIQRSPRVNKSGVISREPSRTREEGITIDQLHKLNPENVSAWNMKRLMNIIRHGSITTLDEHAIDSASYDESATQIRSENEAKAAAKKIFQNVARRGCRYIYLEDLLRFMREDEAAKTICLFEGALESCESGKISKSALKNWVVQAFRDRRALALTLNDTKTAVNRLHRMLNFLVGVVIFIIWLLILGIATSKFLVVATSQLVVAAFIFGNTCKTIFEAIIFLFVIHPFDVGDRCDIDGIQMVVEEMKILTTVFLRYDNMKVIIPNGVLSTKPIHNYYRSPDMGDAVEFCVHVATPAEKIAAIKQRISSYVDSKKEHWYPNPLFFMKDVEELNRLRIAVWLVHRMTYQDIGERWVRRGQLIEEMSKIFRELDLQYRLYPTDINIRAVPTAISDRLPASWAAAKS* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01864 879 MobiDBLite consensus disorder prediction 199 223 - -
Pte13g01864 879 MobiDBLite consensus disorder prediction 1 49 - -
Pte13g01864 879 MobiDBLite consensus disorder prediction 470 490 - -
Pte13g01864 879 MobiDBLite consensus disorder prediction 1 78 - -
Pte13g01864 879 Coils Coil 430 450 - -
Pte13g01864 879 Pfam Mechanosensitive ion channel 645 847 IPR006685 GO:0016020|GO:0055085
Pte13g01864 879 MobiDBLite consensus disorder prediction 99 120 - -
Pte13g01864 879 MobiDBLite consensus disorder prediction 201 218 - -
Pte13g01864 879 PIRSF Memb_At2g17000 2 879 IPR016688 -
Pte13g01864 879 MobiDBLite consensus disorder prediction 152 173 - -
Pte13g01864 879 Gene3D - 703 752 IPR023408 -
Pte13g01864 879 MobiDBLite consensus disorder prediction 470 496 - -
Pte13g01864 879 SUPERFAMILY Sm-like ribonucleoproteins 693 752 IPR010920 -
Pte13g01864 879 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 75 874 IPR016688 -
Pte13g01864 879 FunFam Predicted mechanosensitive ion channel 703 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01864 Pte-Chr13 31314011 31320777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01864 7 879 Mechanosensitive Ion Channel Family AT1G78610 55.275 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01864 K22048 - qsa:O6P43_011418 1162.52