Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01862 ATGACAACGAGAGCCGTGAAAGAAGAGTACAGGATACGTTTCAGCGGTCCGAACCCGGAACAGAAACAGAAGCTTGAGGTTTACAATGAGGTGCTTCGTCGGCTTAAGGATTCAGACATTCGAAAAGCTCTGCAGCCTCGTTTCGACGATGAACTTTGGGCTCACGTTAATCGCCTCCCTGCACGATACGGTCTACGCCCGACCATTCCAAAACACACCCATCCAAAGTTTGCTGAGCTTCTTGAGAGATGCTGGCAGCAAGATCCCACATTAAGACCTGACTTCACAGAAATGGTAAAGATTTTGCAGCATTTGGAAAAGGAGGTTGGAGATGAAGGTGAGGAACGTCAAAAGGAAAATTCTCCAGGATTCTTGTCTGCCCTTAGAAGAAACCATCACTGA 402 0.4726 MTTRAVKEEYRIRFSGPNPEQKQKLEVYNEVLRRLKDSDIRKALQPRFDDELWAHVNRLPARYGLRPTIPKHTHPKFAELLERCWQQDPTLRPDFTEMVKILQHLEKEVGDEGEERQKENSPGFLSALRRNHH* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01862 133 Gene3D Transferase(Phosphotransferase) domain 1 12 127 - -
Pte13g01862 133 SUPERFAMILY Protein kinase-like (PK-like) 58 103 IPR011009 -
Pte13g01862 133 MobiDBLite consensus disorder prediction 108 133 - -
Pte13g01862 133 Pfam Protein tyrosine and serine/threonine kinase 64 102 IPR001245 GO:0004672|GO:0006468
Pte13g01862 133 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 61 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01862 Pte-Chr13 31306678 31308565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01862 64 132 MAP Kinase Kinase Kinase AT4G35780 56.522 2.05e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte13g01862 PK_Tyr_Ser-Thr 1.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01862 - - sind:105169821 122.864