Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01853 ATGGTAAACCCAAAAAGGCTTATTCAATTTGCAAGGAAGTGGCAGAGAATGGCAGCCATGAAGCGCAAGATGATTTCCCACCCAGCAAAGGACACGAATATCAGTTCTTCTACTCCTTCTGGGGTTAGCAGAGGTCACTTTGTTGTGTACAGCATGGATCACAAAAGGTTCTTGCTGCCATTGAATTATTTAAGCAACAATGTGTTTAGAGAGCTTTTCAGAATGTCTGAAGAGGAGTTTGGACTACCCGCCAATGGACCGATCAGATTACCATGTGATGCCAATTTGTTGGAGTACATTGTTTCAATGGTACGGCAAAATTTACCTGAATGCCTAGAGAGAGCATTGCTCCTGTCCGTGGCAACATCTACTTGTCATAGCTTTGCTCCATCTTCACTTGTTTCAGCACAAAGTCACAGTCAAACAGTTATTTGTGGATTTTGA 444 0.4257 MVNPKRLIQFARKWQRMAAMKRKMISHPAKDTNISSSTPSGVSRGHFVVYSMDHKRFLLPLNYLSNNVFRELFRMSEEEFGLPANGPIRLPCDANLLEYIVSMVRQNLPECLERALLLSVATSTCHSFAPSSLVSAQSHSQTVICGF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01853 147 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 133 IPR003676 GO:0009733
Pte13g01853 147 Pfam Auxin responsive protein 12 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01853 Pte-Chr13 31213077 31213520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01853 30 108 Calmodulin-binding Proteins AT5G20810 32.500 2.62e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01853 - - jre:109006507 167.162