Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01848 ATGGAGTGTTGCCACTGTTCTGATTTTGACTTGACCAGCGGTGATGGGGTCATGGGCAGGTCGGGGACTTTGAACGACCTCCATGAGATAGCGAAACGAATGGTGGCTGCGGGGTTTGGTAAGGAGTGCTCACATGTGTATAGAAGTTGCAGAAGGGAGTTCTTAGAGGAGAGTTTGTCAAGGTTGGGGTTGCAGAAGCTTAGCATTGAAGACGTTTATAAGATGTCATGGCAGGACCTTGAAGATGAAATTGATCGGTGGATTAAGGTATCCAACGTTACTCTTCGGATACTTTTCCCAAGCGAGCGGCGGCTCTGTGATCTTGTCTTCTTGGGGTTCTCGTCAGCAGCAGATCTCTCCTTCATGGAGATTCTTGACGTGTTTGAGACGTTGAGGGATTTGTTGCCTGAGTTTGAATTGATGTTTTCTGATCAGTACTGTATGATCATTAGGAATGAAGCAATTATTACATGGAAGAGGTTAGGAGAAGCAATCAGAGGTATTTTCATGGAGTCAGAGAATTTGATTCGTCGTGACCCTGCAAATCAAGTCGTTCTTGGGTGCATCCCATTACTAGGTATGTGA 585 0.4564 MECCHCSDFDLTSGDGVMGRSGTLNDLHEIAKRMVAAGFGKECSHVYRSCRREFLEESLSRLGLQKLSIEDVYKMSWQDLEDEIDRWIKVSNVTLRILFPSERRLCDLVFLGFSSAADLSFMEILDVFETLRDLLPEFELMFSDQYCMIIRNEAIITWKRLGEAIRGIFMESENLIRRDPANQVVLGCIPLLGM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01848 194 Gene3D Exocyst complex component Exo70 9 189 - -
Pte13g01848 194 Pfam Exo70 exocyst complex subunit 122 184 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte13g01848 194 SUPERFAMILY Cullin repeat-like 21 184 IPR016159 -
Pte13g01848 194 PANTHER EXOCYST COMPLEX PROTEIN EXO70 20 186 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01848 Pte-Chr13 31171843 31172641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01848 21 187 EXO70 exocyst subunit family AT5G58430 68.205 4.16e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01848 K07195 - mnt:21394415 272.707