Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01840 ATGCACAAGCAAACAGGGCATCTGTACGTGAAGAGTGATGTGTATGGTTTTGGTGTGGTTTTGGTTGAGATACTCACATGCCTTAGGGCACTAGACACTAACCGTCCAACTGCGCAACATAAACTGGTGGACTGGATAAAACCATTTCTGCAAGATAGAAGGAAGCTAAAAAGCATTATGGATTCAAGATTAGAGGGTAAATATCCATCCAAAGCTGCCTTTCATATAGCTCAGCTTGCACTGAAATGCGTTGAAGTTGAGCCTAAACACCGGCCATCAATGAAGGAAGTTTTGGAGAGTCTTGAAAGGATACAATCTGCCAATGACAATCAAATAGAAAGCAAACAGCTATCAAGTCCTCACAGGGCTTACCGTCATGGCCAGCAGCCTCTGCATCATCGCTCACCCCTCCATCCCAAGCAGGATGGTAGAATCCACCAACACCCAGCAAAACTCAGATAA 462 0.4481 MHKQTGHLYVKSDVYGFGVVLVEILTCLRALDTNRPTAQHKLVDWIKPFLQDRRKLKSIMDSRLEGKYPSKAAFHIAQLALKCVEVEPKHRPSMKEVLESLERIQSANDNQIESKQLSSPHRAYRHGQQPLHHRSPLHPKQDGRIHQHPAKLR* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01840 153 MobiDBLite consensus disorder prediction 108 153 - -
Pte13g01840 153 MobiDBLite consensus disorder prediction 135 153 - -
Pte13g01840 153 SUPERFAMILY Protein kinase-like (PK-like) 7 116 IPR011009 -
Pte13g01840 153 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01840 153 Pfam Protein tyrosine and serine/threonine kinase 6 101 IPR001245 GO:0004672|GO:0006468
Pte13g01840 153 Gene3D Transferase(Phosphotransferase) domain 1 2 127 - -
Pte13g01840 153 MobiDBLite consensus disorder prediction 108 123 - -
Pte13g01840 153 PANTHER OS01G0588500 PROTEIN-RELATED 4 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01840 Pte-Chr13 31087544 31088326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01840 2 105 Receptor kinase-like Gene Family AT4G02010 46.154 2.28e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte13g01840 PK_Tyr_Ser-Thr 9.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01840 - - qsa:O6P43_011380 223.016