Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01837 ATGGGCAATCAATGCCGTGGATCTTTCGGGGGGAAATATTACCAGGGCGACAGCAAGCCCGTAGATCTCTCCAATTCCAACCGTAACAACAAGGATCTCTCCTGCTCTAATCATCCTCCCAGCTCCAGCCTAAACTCTCAGTTTCCCAACGACGATTCCAACACTATGAGCGACCCTCACAACACTTCTTACCCTTCTAATGCCCCCAACACCAACCTAGCCCCTGTCAACGTACCTAAGAAAGACCTCTACGTGAGGCGTGGTAGTGAAACACAAGCTTACTATGTTCTTGGTCATAAGACTGTCAACATTCGGGATCTATATACCATGGGTCGTAAATTAGGGCAGGGACAGTTCGGGACCACTTACTTGTGCACTGAGAATTCTAGTGGCGTTGAGTATGCATGCAAGTCTATTTCCAAGAGGAAGTTGATCTCCAAGGAGGATGTGGAGGATGTCAGGAGGGAGATTCAGATCATGCACCATTTGGCAGGTCACAAGCATATAGTTACCATAAAGGGTGCTTACGAAGACCCCTTGTATGTCCATATAGTCATGGAGCTTTGCGGTGGCGGTGAGTTGTTTGACCGAATAATTCAGCGGGGACACTACAGTGAGAGGAAGGCTGCTGAGCTTACTAAGATAATTGTAGGAGTAGTCCAGGCATGTCACTCGCTTGGGGTTATGCATAGAGATCTCAAGCCTGAAAATTTCCTCTTGGTCAATAAAGATGATGATTTCTCTCTCAAAGCAATTGATTTTGGGCTCTCTGTATTCTTCAAACCAGGTCAAGTTTTCACTGATGTGGTTGGGAGCCCATACTATGTTGCTCCCGAGGTTCTCCTCAAGCATTATGGGCCAGAAGCAGATGTATGGACAGCAGGTGTCATTCTATATATATTACTCAGTGGTGTGCCACCATTCTGGGCAGAAACCCAGCAGGGGATATTCGATGCTGTCTTGAAGGGATATATTGATTTTGATTCAGATCCATGGCCCTTGATTTCTGACAGTGCTAAGGACCTTATTCGGAAGATGCTTTGTTCTAAACCAGCTGAGCGGTTGACTGCTCATCAAGTGTTATGTCATCCTTGGATTTGTGAAAATGGAGTTGCCCCTGATAGAGCACTTGATCCTGCTGTACTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAATTAAAGAAGATGGCTCTAAGGGTAATAGCTGAAAGTCTATCTGAGGAGGAGATTGCCGGTTTGAGAGAAATGTTTCAATCAATGGATACAGATAACAGTGGTGCAATCACATTTGATGAACTTAAAGCTGGTTTACATAGATATGGTTCTACATTAAAGGACACAGAAATACGTGATCTAATGGATGCGGCTGATGTGGATAACAGCGGGACTATAGACTATGGGGAGTTTGTAGCTGCAACCCTTCACCTTAACAAACTAGAACGTGAGGAACATCTTGTTGCAGCATTTCAATACTTTGATAAGGATGGAAGTGGATATATTACAGTCGACGAACTTCAGCAAGCTTGTGCTGAGCACCACATGACTGATGTACCTCTTGAAGATATTATCAGGGAAGTAGACCAAGATAATGATGGAAGGATTGATTATGGTGAATTCGTTGCCATGATGCAAAAAGGAAATGCTGGAATAGGGAGGCGAACTATGCGAAACAGTGTAAATTTAAGTATGAGAGATGCAGCATGTTCTCGTTAG 1716 0.4417 MGNQCRGSFGGKYYQGDSKPVDLSNSNRNNKDLSCSNHPPSSSLNSQFPNDDSNTMSDPHNTSYPSNAPNTNLAPVNVPKKDLYVRRGSETQAYYVLGHKTVNIRDLYTMGRKLGQGQFGTTYLCTENSSGVEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKHIVTIKGAYEDPLYVHIVMELCGGGELFDRIIQRGHYSERKAAELTKIIVGVVQACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGYIDFDSDPWPLISDSAKDLIRKMLCSKPAERLTAHQVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQSMDTDNSGAITFDELKAGLHRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFVAATLHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHHMTDVPLEDIIREVDQDNDGRIDYGEFVAMMQKGNAGIGRRTMRNSVNLSMRDAACSR* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01837 571 ProSiteProfiles EF-hand calcium-binding domain profile. 520 550 IPR002048 GO:0005509
Pte13g01837 571 ProSitePatterns EF-hand calcium-binding domain. 494 506 IPR018247 -
Pte13g01837 571 SUPERFAMILY Protein kinase-like (PK-like) 88 390 IPR011009 -
Pte13g01837 571 Gene3D Phosphorylase Kinase; domain 1 110 193 - -
Pte13g01837 571 MobiDBLite consensus disorder prediction 1 76 - -
Pte13g01837 571 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Pte13g01837 571 CDD STKc_CAMK 108 365 - -
Pte13g01837 571 CDD EFh 485 545 IPR002048 GO:0005509
Pte13g01837 571 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Pte13g01837 571 SUPERFAMILY EF-hand 406 546 IPR011992 -
Pte13g01837 571 ProSitePatterns EF-hand calcium-binding domain. 528 540 IPR018247 -
Pte13g01837 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Pte13g01837 571 SMART efh_1 413 441 IPR002048 GO:0005509
Pte13g01837 571 SMART efh_1 449 477 IPR002048 GO:0005509
Pte13g01837 571 SMART efh_1 519 547 IPR002048 GO:0005509
Pte13g01837 571 SMART efh_1 485 513 IPR002048 GO:0005509
Pte13g01837 571 SMART serkin_6 108 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01837 571 PANTHER SERINE/THREONINE-PROTEIN KINASE 101 540 - -
Pte13g01837 571 FunFam Calcium-dependent protein kinase 1 374 548 - -
Pte13g01837 571 Gene3D Transferase(Phosphotransferase) domain 1 194 390 - -
Pte13g01837 571 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Pte13g01837 571 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Pte13g01837 571 FunFam Calcium-dependent protein kinase 1 110 193 - -
Pte13g01837 571 Gene3D - 391 550 - -
Pte13g01837 571 ProSiteProfiles Protein kinase domain profile. 108 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01837 571 Pfam Protein kinase domain 108 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01837 571 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Pte13g01837 571 ProSiteProfiles EF-hand calcium-binding domain profile. 481 516 IPR002048 GO:0005509
Pte13g01837 571 FunFam Calcium-dependent protein kinase 5 194 374 - -
Pte13g01837 571 Pfam EF-hand domain pair 484 545 IPR002048 GO:0005509
Pte13g01837 571 Pfam EF-hand domain pair 414 474 IPR002048 GO:0005509
Pte13g01837 571 MobiDBLite consensus disorder prediction 19 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01837 Pte-Chr13 31053069 31058001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01837 1 567 EF-hand Containing Proteins AT4G35310 81.338 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte13g01837 Pkinase 9.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01837 K13412 - qsa:O6P43_002195 987.638